BLASTX nr result

ID: Atractylodes22_contig00057067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00057067
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542669.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   142   3e-32
emb|CBI25589.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32
ref|XP_002309312.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   142   3e-32

>ref|XP_003542669.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
           component-like [Glycine max]
          Length = 986

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/81 (88%), Positives = 78/81 (96%)
 Frame = -1

Query: 244 SIKAVPMSLVLKDSNSKSYMCNIMDTPGNVSFSDEMTVALRLADGAVLMVDAVEGVMVNT 65
           SIKAVPMSLVL+DSNSKSY+CNIMDTPG+V+FSDEMT ALRLADGAVL+VDA EGVMVNT
Sbjct: 190 SIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADGAVLIVDAAEGVMVNT 249

Query: 64  ERAIRHAIQDGLPIVVVINKV 2
           ERAIRHAIQ+ LPIVVVINKV
Sbjct: 250 ERAIRHAIQERLPIVVVINKV 270


>emb|CBI25589.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/81 (88%), Positives = 78/81 (96%)
 Frame = -1

Query: 244 SIKAVPMSLVLKDSNSKSYMCNIMDTPGNVSFSDEMTVALRLADGAVLMVDAVEGVMVNT 65
           SIKAVPMSLVL+DSNSKSY+CNIMDTPG+V+FSDEMT ALRLADGAVL+VDA EGVMVNT
Sbjct: 135 SIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADGAVLIVDAAEGVMVNT 194

Query: 64  ERAIRHAIQDGLPIVVVINKV 2
           ERAIRHAIQ+ LPIVVVINKV
Sbjct: 195 ERAIRHAIQERLPIVVVINKV 215


>ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|222866009|gb|EEF03140.1|
           predicted protein [Populus trichocarpa]
          Length = 869

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/81 (88%), Positives = 78/81 (96%)
 Frame = -1

Query: 244 SIKAVPMSLVLKDSNSKSYMCNIMDTPGNVSFSDEMTVALRLADGAVLMVDAVEGVMVNT 65
           SIKAVPMSLVL+DSNSKSY+CNIMDTPG+V+FSDEMT ALRLADGAVL+VDA EGVMVNT
Sbjct: 192 SIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADGAVLVVDAAEGVMVNT 251

Query: 64  ERAIRHAIQDGLPIVVVINKV 2
           ERAIRHAIQ+ LPIVVVINKV
Sbjct: 252 ERAIRHAIQEQLPIVVVINKV 272


>ref|XP_002309312.1| predicted protein [Populus trichocarpa] gi|222855288|gb|EEE92835.1|
           predicted protein [Populus trichocarpa]
          Length = 988

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/81 (88%), Positives = 78/81 (96%)
 Frame = -1

Query: 244 SIKAVPMSLVLKDSNSKSYMCNIMDTPGNVSFSDEMTVALRLADGAVLMVDAVEGVMVNT 65
           SIKAVPMSLVL+DSNSKSY+CNIMDTPG+V+FSDEMT ALRLADGAVL+VDA EGVMVNT
Sbjct: 192 SIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADGAVLIVDAAEGVMVNT 251

Query: 64  ERAIRHAIQDGLPIVVVINKV 2
           ERAIRHAIQ+ LPIVVVINKV
Sbjct: 252 ERAIRHAIQEQLPIVVVINKV 272


>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
           [Vitis vinifera] gi|147858113|emb|CAN81413.1|
           hypothetical protein VITISV_031170 [Vitis vinifera]
          Length = 988

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/81 (88%), Positives = 78/81 (96%)
 Frame = -1

Query: 244 SIKAVPMSLVLKDSNSKSYMCNIMDTPGNVSFSDEMTVALRLADGAVLMVDAVEGVMVNT 65
           SIKAVPMSLVL+DSNSKSY+CNIMDTPG+V+FSDEMT ALRLADGAVL+VDA EGVMVNT
Sbjct: 192 SIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADGAVLIVDAAEGVMVNT 251

Query: 64  ERAIRHAIQDGLPIVVVINKV 2
           ERAIRHAIQ+ LPIVVVINKV
Sbjct: 252 ERAIRHAIQERLPIVVVINKV 272


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