BLASTX nr result

ID: Atractylodes22_contig00056950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056950
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA42178.1| TPA: putative H/ACA ribonucleoprotein complex su...    55   8e-06
gb|ACG42290.1| h/ACA ribonucleoprotein complex subunit 1-like pr...    55   8e-06
gb|ACG27024.1| h/ACA ribonucleoprotein complex subunit 1-like pr...    55   8e-06
ref|NP_001132376.1| uncharacterized protein LOC100193822 [Zea ma...    55   8e-06

>tpg|DAA42178.1| TPA: putative H/ACA ribonucleoprotein complex subunit family
           protein [Zea mays]
          Length = 106

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +2

Query: 2   VTKLANEKIPYFSVPNHLQNKSQKGKVDKIFSPHN 106
           VTKL NEK+PYF+ P +LQNK+Q GKVD+IF P N
Sbjct: 63  VTKLTNEKVPYFNAPIYLQNKTQVGKVDEIFGPIN 97


>gb|ACG42290.1| h/ACA ribonucleoprotein complex subunit 1-like protein 1 [Zea mays]
          Length = 191

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +2

Query: 2   VTKLANEKIPYFSVPNHLQNKSQKGKVDKIFSPHN 106
           VTKL NEK+PYF+ P +LQNK+Q GKVD+IF P N
Sbjct: 63  VTKLTNEKVPYFNAPIYLQNKTQVGKVDEIFGPIN 97


>gb|ACG27024.1| h/ACA ribonucleoprotein complex subunit 1-like protein 1 [Zea mays]
          Length = 191

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +2

Query: 2   VTKLANEKIPYFSVPNHLQNKSQKGKVDKIFSPHN 106
           VTKL NEK+PYF+ P +LQNK+Q GKVD+IF P N
Sbjct: 63  VTKLTNEKVPYFNAPIYLQNKTQVGKVDEIFGPIN 97


>ref|NP_001132376.1| uncharacterized protein LOC100193822 [Zea mays]
           gi|194694218|gb|ACF81193.1| unknown [Zea mays]
          Length = 191

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +2

Query: 2   VTKLANEKIPYFSVPNHLQNKSQKGKVDKIFSPHN 106
           VTKL NEK+PYF+ P +LQNK+Q GKVD+IF P N
Sbjct: 63  VTKLTNEKVPYFNAPIYLQNKTQVGKVDEIFGPIN 97


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