BLASTX nr result

ID: Atractylodes22_contig00056941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056941
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   2e-07
emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   1e-06
gb|AFM94019.1| LINE RNAaseH [Beta vulgaris]                            55   5e-06
ref|XP_003638683.1| hypothetical protein MTR_139s0035 [Medicago ...    55   8e-06

>emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
 Frame = +2

Query: 5    ETVNHLFFQCPFSTQVWKLLFNWWGLTARQIVSLEDILDCSNIPGLKPQLRECWKATVLT 184
            ET  HL   CP ++Q+W      W +     +SL +       P   P  ++ W A    
Sbjct: 1098 ETAEHLLLHCPVASQIWSWWIGLWRIKWAFPLSLREAFTQWFWPKNSPFFKKVWSAVFFI 1157

Query: 185  TLYTIWIARNQRVFTNHP--MKPPKECVFDIQLQVFFWLSHRSKDFHYSWID 334
             ++T+W  RNQR+F+N+P  +K  K+ V    +++ +W+S    +F Y+  D
Sbjct: 1158 IVWTLWKERNQRIFSNNPSTVKVLKDMVL---MRLGWWISGWKDEFPYNPTD 1206


>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1380

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/110 (31%), Positives = 49/110 (44%)
 Frame = +2

Query: 5    ETVNHLFFQCPFSTQVWKLLFNWWGLTARQIVSLEDILDCSNIPGLKPQLRECWKATVLT 184
            E  NHL   CPFS  +W    + W L      +L  + D    P   P  ++ W AT   
Sbjct: 1098 EQHNHLLLHCPFSLSLWNWWLDLWRLKWVLPETLRGLFDQWLSPIKTPFFKKVWAATFFI 1157

Query: 185  TLYTIWIARNQRVFTNHPMKPPKECVFDIQLQVFFWLSHRSKDFHYSWID 334
              ++IW  RN R+F N    PP      I L++ +W+S   + F YS  D
Sbjct: 1158 ISWSIWKERNSRIFEN-TSSPPSSLHDLILLRLGWWISGWDEAFPYSPTD 1206


>gb|AFM94019.1| LINE RNAaseH [Beta vulgaris]
          Length = 416

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/107 (28%), Positives = 53/107 (49%)
 Frame = +2

Query: 5   ETVNHLFFQCPFSTQVWKLLFNWWGLTARQIVSLEDILDCSNIPGLKPQLRECWKATVLT 184
           E ++HLF  CPFS ++W   ++ W L+     SL   L   N P  +   ++ W A  + 
Sbjct: 125 EDISHLFLFCPFSMEIWAWWWDLWNLSWVWPKSLNLALSQWNYPRKEKLFKKIWLAAFIV 184

Query: 185 TLYTIWIARNQRVFTNHPMKPPKECVFDIQLQVFFWLSHRSKDFHYS 325
            +++IW  RN+R+F N       E    I +++ +W+   +  F Y+
Sbjct: 185 IIWSIWRERNERIF-NKKESSVSEIKNLILVRLCWWMKPWNLSFPYT 230


>ref|XP_003638683.1| hypothetical protein MTR_139s0035 [Medicago truncatula]
           gi|355504618|gb|AES85821.1| hypothetical protein
           MTR_139s0035 [Medicago truncatula]
          Length = 341

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/101 (30%), Positives = 50/101 (49%)
 Frame = +2

Query: 8   TVNHLFFQCPFSTQVWKLLFNWWGLTARQIVSLEDILDCSNIPGLKPQLRECWKATVLTT 187
           T  HLF  C  S+ +W+ + NW G+      +L    +C N   +  +LR+ +      T
Sbjct: 149 TSTHLFLHCDVSSLIWRGILNWLGMNFITPHNLFAHFECWNNEVVSRRLRKGFLLIWHAT 208

Query: 188 LYTIWIARNQRVFTNHPMKPPKECVFDIQLQVFFWLSHRSK 310
           ++ IW+ RN R+F NH  K   E V +I+   + W+  R K
Sbjct: 209 IWLIWMERNARIF-NHKEKDVGELVDEIEAVSWVWMLSRLK 248


Top