BLASTX nr result

ID: Atractylodes22_contig00056929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056929
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634163.1| PREDICTED: nascent polypeptide-associated co...   109   3e-22
ref|XP_002521293.1| nascent polypeptide associated complex alpha...   105   3e-21
ref|XP_002321358.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_002335149.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
gb|ABK93574.1| unknown [Populus trichocarpa]                          102   3e-20

>ref|XP_003634163.1| PREDICTED: nascent polypeptide-associated complex subunit
           alpha-like protein 2-like [Vitis vinifera]
           gi|302143993|emb|CBI23098.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  109 bits (272), Expect = 3e-22
 Identities = 63/95 (66%), Positives = 65/95 (68%)
 Frame = -3

Query: 285 YVIFGEAKIEDXXXXXXXXXXXQFRVPDMSSVMAKSDTSXXXXXXXXXXXXXXXXETGVE 106
           YVIFGEAKIED           QFR+PDM SVMAKSD S                ETGVE
Sbjct: 113 YVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVMAKSDISAAAAGTQADEEEEVIDETGVE 172

Query: 105 PRDIDLVMTQAGVSRPKAVKALKTHSGDIVSAIME 1
           PRDIDLVMTQAGVSR KAVKALKTH+GDIVSAIME
Sbjct: 173 PRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIME 207


>ref|XP_002521293.1| nascent polypeptide associated complex alpha subunit, putative
           [Ricinus communis] gi|223539478|gb|EEF41067.1| nascent
           polypeptide associated complex alpha subunit, putative
           [Ricinus communis]
          Length = 228

 Score =  105 bits (263), Expect = 3e-21
 Identities = 61/95 (64%), Positives = 64/95 (67%)
 Frame = -3

Query: 285 YVIFGEAKIEDXXXXXXXXXXXQFRVPDMSSVMAKSDTSXXXXXXXXXXXXXXXXETGVE 106
           YVIFGEAKIED           QFR+PDM+SV+ KSD S                ETGVE
Sbjct: 131 YVIFGEAKIEDLSSQLQTQAAQQFRMPDMASVLPKSDLSGAAAAAQADEEEEEVDETGVE 190

Query: 105 PRDIDLVMTQAGVSRPKAVKALKTHSGDIVSAIME 1
           PRDIDLVMTQAGV R KAVKALKTHSGDIVSAIME
Sbjct: 191 PRDIDLVMTQAGVPRSKAVKALKTHSGDIVSAIME 225


>ref|XP_002321358.1| predicted protein [Populus trichocarpa] gi|222868354|gb|EEF05485.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  102 bits (255), Expect = 3e-20
 Identities = 58/95 (61%), Positives = 65/95 (68%)
 Frame = -3

Query: 285 YVIFGEAKIEDXXXXXXXXXXXQFRVPDMSSVMAKSDTSXXXXXXXXXXXXXXXXETGVE 106
           YVIFGEAKIED           QFR+PDMSS++ KSD S                +TGVE
Sbjct: 128 YVIFGEAKIEDLSSQLQTQAAQQFRMPDMSSMLPKSDASTAAASAPPEEEEEEVDDTGVE 187

Query: 105 PRDIDLVMTQAGVSRPKAVKALKTHSGDIVSAIME 1
           PRDIDLVMTQAGVSR KAVKAL+T++GDIVSAIME
Sbjct: 188 PRDIDLVMTQAGVSRTKAVKALQTNNGDIVSAIME 222


>ref|XP_002335149.1| predicted protein [Populus trichocarpa] gi|222832967|gb|EEE71444.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  102 bits (255), Expect = 3e-20
 Identities = 58/95 (61%), Positives = 65/95 (68%)
 Frame = -3

Query: 285 YVIFGEAKIEDXXXXXXXXXXXQFRVPDMSSVMAKSDTSXXXXXXXXXXXXXXXXETGVE 106
           YVIFGEAKIED           QFR+PDMSS++ KSD S                +TGVE
Sbjct: 19  YVIFGEAKIEDLSSQLQTQAAQQFRMPDMSSMLPKSDASTAAASAPPEEEEEEVDDTGVE 78

Query: 105 PRDIDLVMTQAGVSRPKAVKALKTHSGDIVSAIME 1
           PRDIDLVMTQAGVSR KAVKAL+T++GDIVSAIME
Sbjct: 79  PRDIDLVMTQAGVSRTKAVKALQTNNGDIVSAIME 113


>gb|ABK93574.1| unknown [Populus trichocarpa]
          Length = 224

 Score =  102 bits (255), Expect = 3e-20
 Identities = 58/95 (61%), Positives = 65/95 (68%)
 Frame = -3

Query: 285 YVIFGEAKIEDXXXXXXXXXXXQFRVPDMSSVMAKSDTSXXXXXXXXXXXXXXXXETGVE 106
           YVIFGEAKIED           QFR+PDMSS++ KSD S                +TGVE
Sbjct: 127 YVIFGEAKIEDLSSQLQTQAAQQFRMPDMSSMLPKSDASTAAASAPPEEEEEEVDDTGVE 186

Query: 105 PRDIDLVMTQAGVSRPKAVKALKTHSGDIVSAIME 1
           PRDIDLVMTQAGVSR KAVKAL+T++GDIVSAIME
Sbjct: 187 PRDIDLVMTQAGVSRTKAVKALQTNNGDIVSAIME 221


Top