BLASTX nr result

ID: Atractylodes22_contig00056882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056882
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   101   7e-20
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    97   1e-18
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    92   6e-17
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    87   2e-15
ref|XP_004150125.1| PREDICTED: uncharacterized protein LOC101220...    82   5e-14

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/93 (48%), Positives = 69/93 (74%), Gaps = 3/93 (3%)
 Frame = -1

Query: 287 GPRCRRRELSVMVTQEEDDGDFEDPETEIE---SPTEVLTTEISLNSVVGITNPKTMKML 117
           G +CRR+ELSV+  ++ ++ + E   +  E   SPTE +  E+SLNSV+G++NPKTMK+ 
Sbjct: 427 GHQCRRKELSVLFMEDNEEDELEGALSGSEAPPSPTEEIPPEVSLNSVIGLSNPKTMKLS 486

Query: 116 GTLQGHDVVVMVDPGATHNFISLTVVERLALPI 18
           G +  H+VVVM+DPGATHNF+SL  +++L +P+
Sbjct: 487 GLIDNHEVVVMIDPGATHNFLSLKAIDKLGIPV 519


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/100 (48%), Positives = 70/100 (70%), Gaps = 6/100 (6%)
 Frame = -1

Query: 287 GPRCRRRELSVMVTQEEDDGDFED------PETEIESPTEVLTTEISLNSVVGITNPKTM 126
           G RC+++ELS+++  EE++ ++        P    +S  E+ + EISLNSV+GI++PKT+
Sbjct: 361 GHRCKKKELSILLGHEEEEEEYGSLMENIQPAHPDDSQLEIHSPEISLNSVMGISSPKTL 420

Query: 125 KMLGTLQGHDVVVMVDPGATHNFISLTVVERLALPIDPTK 6
           KM GT+ G  V+VMVDPGATHNFISL  V RL +PI  ++
Sbjct: 421 KMEGTIYGQKVIVMVDPGATHNFISLDTVRRLQIPISSSR 460


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 51/104 (49%), Positives = 74/104 (71%), Gaps = 9/104 (8%)
 Frame = -1

Query: 287 GPRCRRRELSVMVTQEEDD----GDFED-PETEIESPTEVLTT----EISLNSVVGITNP 135
           G RC++ ELSV+++ +ED+    G+ E+ P+ EI + T +  T    EISLNSV+G +NP
Sbjct: 318 GHRCKK-ELSVLLSCKEDEEIEYGELENAPQPEIPN-THIAETFVNPEISLNSVMGFSNP 375

Query: 134 KTMKMLGTLQGHDVVVMVDPGATHNFISLTVVERLALPIDPTKG 3
           KT+K+ GT+ G  V+VM+DPGATHNF+S+  VERL +P+   KG
Sbjct: 376 KTLKLRGTIYGEAVIVMIDPGATHNFVSIHTVERLNIPVSHAKG 419


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
 Frame = -1

Query: 287  GPRCRR--RELSVMVTQEEDDGDFEDPETEIESPTEVL-TTEISLNSVVGITNPKTMKML 117
            G RC++  R L V   +EEDD  F+D  TE  +  E+    E+SLNSVVG+T P TMK+ 
Sbjct: 1003 GHRCKKELRVLLVHEDEEEDDNQFDDRATEEPALIELKDAVELSLNSVVGLTTPGTMKIK 1062

Query: 116  GTLQGHDVVVMVDPGATHNFISLTVVERLALPIDPT 9
            GT+   +V+++VD GATHNF+SL +V++L LP+  T
Sbjct: 1063 GTIGSKEVIILVDSGATHNFLSLELVQQLTLPLTTT 1098


>ref|XP_004150125.1| PREDICTED: uncharacterized protein LOC101220785 [Cucumis sativus]
          Length = 2047

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
 Frame = -1

Query: 287 GPRCRRRELSV-MVTQEEDDGDFEDPETEIESPTEVLTTEISLNSVVGITNPKTMKMLGT 111
           G RC+ +EL + +V  + +D   ED E E          E+SLNSVVG+T P T K+ GT
Sbjct: 711 GQRCKNKELRLYLVANDLEDTKMEDVENENAMVEVSPVVELSLNSVVGLTAPSTFKVKGT 770

Query: 110 LQGHDVVVMVDPGATHNFISLTVVERLALPIDPT 9
           ++  ++++MVD GATHNFISL  VE+L LP+  T
Sbjct: 771 VEDREIIIMVDCGATHNFISLMRVEKLKLPMAET 804


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