BLASTX nr result

ID: Atractylodes22_contig00056880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056880
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74319.1| hypothetical protein VITISV_035345 [Vitis vinifera]    94   2e-17
emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera]    93   2e-17
emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]    91   8e-17
ref|XP_002273591.2| PREDICTED: uncharacterized protein LOC100254...    91   1e-16
gb|ABN08665.1| reverse transcriptase - beet retrotransposon, put...    91   1e-16

>emb|CAN74319.1| hypothetical protein VITISV_035345 [Vitis vinifera]
          Length = 1802

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 47/144 (32%), Positives = 81/144 (56%)
 Frame = -1

Query: 433  LKVISLNIHSMGSIDKRRWIRDIVQANSVTFLGIQESKILSIEDHQVANIWRDSDFGFAV 254
            +K+IS N   +GS  KRR ++D +++     + IQE+K    +   V ++W   +  +AV
Sbjct: 780  IKIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSLWTARNKEWAV 839

Query: 253  VPSMGRSGGLVSIWDSSFFNADFAVGGVWFLGVVGTVQGSDSKVGFLNIYGPQDSSEKDE 74
            +P+ G SGG++ +WDS   +++  V G + + V   V GS+ +     +YGP  ++ + +
Sbjct: 840  LPACGASGGILVMWDSKKLHSEEVVLGSFSVSVKFAVDGSE-QFWLSAVYGPNSTALRKD 898

Query: 73   LWNSLSVLMGTHSAAWCIQGDFNV 2
             W  LS + G  S  WC+ GDFNV
Sbjct: 899  FWEELSDIFGLSSPCWCVGGDFNV 922


>emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera]
          Length = 1765

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/143 (33%), Positives = 80/143 (55%)
 Frame = -1

Query: 430 KVISLNIHSMGSIDKRRWIRDIVQANSVTFLGIQESKILSIEDHQVANIWRDSDFGFAVV 251
           K+IS N   +GS  KRR ++D +++     + IQE+K    +   V ++W   +  +AV+
Sbjct: 113 KIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSVWTARNKEWAVL 172

Query: 250 PSMGRSGGLVSIWDSSFFNADFAVGGVWFLGVVGTVQGSDSKVGFLNIYGPQDSSEKDEL 71
           P+ G SGG++ IWDS   +++  V G + + V   V GS+ +     +YGP  ++ + + 
Sbjct: 173 PACGASGGILVIWDSKKLHSEEVVLGSFSVSVKFAVDGSE-QFWJSAVYGPNSTALRKDF 231

Query: 70  WNSLSVLMGTHSAAWCIQGDFNV 2
           W  LS + G  S  WC+ GDFNV
Sbjct: 232 WVELSDIFGLSSPCWCVGGDFNV 254


>emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]
          Length = 1881

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 46/146 (31%), Positives = 82/146 (56%)
 Frame = -1

Query: 439  FSLKVISLNIHSMGSIDKRRWIRDIVQANSVTFLGIQESKILSIEDHQVANIWRDSDFGF 260
            F +K+IS N   +GS  KRR ++D +++     +  QE+K    +   V ++W   +  +
Sbjct: 828  FHMKIISWNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDW 887

Query: 259  AVVPSMGRSGGLVSIWDSSFFNADFAVGGVWFLGVVGTVQGSDSKVGFLNIYGPQDSSEK 80
            A +P+ G SGG++ IWD+   + +  + G + + +  T+ G +S +    +YGP +S+ +
Sbjct: 888  AALPACGASGGILIIWDTKKLSREEVMLGSFSVSIKFTLNGCES-LWLSAVYGPNNSALR 946

Query: 79   DELWNSLSVLMGTHSAAWCIQGDFNV 2
             +LW  LS + G  S  WC+ GDFNV
Sbjct: 947  KDLWVELSDIAGLASPRWCVGGDFNV 972


>ref|XP_002273591.2| PREDICTED: uncharacterized protein LOC100254784 [Vitis vinifera]
          Length = 2201

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/142 (32%), Positives = 79/142 (55%)
 Frame = -1

Query: 427  VISLNIHSMGSIDKRRWIRDIVQANSVTFLGIQESKILSIEDHQVANIWRDSDFGFAVVP 248
            +IS N   +GS  KRR ++D +++     + IQE+K    +   V ++W   +  +AV+P
Sbjct: 1341 IISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSLWTARNKEWAVLP 1400

Query: 247  SMGRSGGLVSIWDSSFFNADFAVGGVWFLGVVGTVQGSDSKVGFLNIYGPQDSSEKDELW 68
            + G SGG++ +WDS   +++  V G + + V   V GS+ +     +YGP  ++ + + W
Sbjct: 1401 ACGASGGILVMWDSKKLHSEEVVLGSFSVSVKFAVDGSE-QFWLSAVYGPNSTALRKDFW 1459

Query: 67   NSLSVLMGTHSAAWCIQGDFNV 2
              LS + G  S  WC+ GDFNV
Sbjct: 1460 EELSDIFGLSSPCWCVGGDFNV 1481


>gb|ABN08665.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 152

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/145 (31%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
 Frame = -1

Query: 433 LKVISLNIHSMGSIDKRRWIRDIVQANSVTFLGIQESKILSIEDHQVANIWRDSDFGFAV 254
           +K++S+NI  +G+ +KRR I  +V    +T L +QE+K+  +++    +IW  +   F+ 
Sbjct: 1   MKILSVNIRGLGAPEKRREIHRLVAERKLTVLCLQETKLEVVDEFLCRSIWGPTPMAFSF 60

Query: 253 VPSMGRSGGLVSIWDSSFFNADFAVGGVWFLGVVGTVQGSDSKVGFLNIYGPQDSSEKDE 74
             S+G SGG++++WD S  +    V     L + G+   ++      NIY P +   +  
Sbjct: 61  KSSVGASGGIITVWDPSVLDVWMTVNIANCLMIKGSFLKNNDMFCLANIYAPSNIRGRQM 120

Query: 73  LWNSLSVLMGTH-SAAWCIQGDFNV 2
           LW ++S  + +H   AWC+ GDFNV
Sbjct: 121 LWEAVSNFLLSHGDVAWCVLGDFNV 145


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