BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056866
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC28209.1| contains similarity to reverse transcriptases [Ar...    95   7e-18
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    95   7e-18
gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indi...    89   3e-16
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...    89   3e-16
gb|ABB47203.2| retrotransposon protein, putative, unclassified [...    82   5e-14

>gb|AAC28209.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267168|emb|CAB77880.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 467

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 43/90 (47%), Positives = 60/90 (66%)
 Frame = +2

Query: 2   NWYMDTGATSHMTNNSGILSSYFNNKSFNDITVGDGSRIPIHGSGHTILKPPLPPFKLNH 181
           +WYMDTGAT+H+T   G L S FN+ S   + VG+GS +P    G++ L   + P  L++
Sbjct: 299 SWYMDTGATTHLTAQPGTLHSLFNSSSSPSVVVGNGSSVPTKAIGYSFLPSKIRPLHLHN 358

Query: 182 ILYLPHLIKNLLSVRRFATDNQVSIEFDAF 271
           +L  P +IKNL+SVR+F  DN VS+EFD F
Sbjct: 359 VLVCPSIIKNLVSVRQFTKDNYVSVEFDPF 388


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/90 (50%), Positives = 59/90 (65%)
 Frame = +2

Query: 2   NWYMDTGATSHMTNNSGILSSYFNNKSFNDITVGDGSRIPIHGSGHTILKPPLPPFKLNH 181
           NWYMD+ ATSH+T+N G L S FN  +   +TVG+GS  P+   GH  L  P   F L +
Sbjct: 361 NWYMDSAATSHITSNIGNLQSTFNTSTMPLVTVGNGSLAPVETIGHGTLSYPSRSFSLRN 420

Query: 182 ILYLPHLIKNLLSVRRFATDNQVSIEFDAF 271
           +L  P ++KNL+SVR+F TDN  +IEFD F
Sbjct: 421 VLVCPAIVKNLVSVRKFVTDNWCTIEFDPF 450


>gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indica Group]
          Length = 964

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2   NWYMDTGATSHMTNNSGILS--SYFNNKSFNDITVGDGSRIPIHGSGHTILKPPLPPFKL 175
           +WY+D+GA+SHMT+++G LS  S  N  + + I VGDGS +PI  +G T L  P   F L
Sbjct: 564 DWYIDSGASSHMTSDAGTLSFSSQPNPNTPSHIIVGDGSPLPITATGSTHLSFPHRSFVL 623

Query: 176 NHILYLPHLIKNLLSVRRFATDNQVSIEFD 265
           N++L  P +IKNL+ VRRFA DN VS+EFD
Sbjct: 624 NNVLVSPEIIKNLIVVRRFARDNDVSVEFD 653


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1679

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
 Frame = +2

Query: 2   NWYMDTGATSHMTNNSGILSSYF--NNKSFNDITVGDGSRIPIHGSGHTILKPPLPPFKL 175
           +WYMDTGAT+HMT+++GILS     N  S + I VG+GS IP+   GH+ +  P   F L
Sbjct: 559 DWYMDTGATAHMTSDTGILSLSHPPNPNSPSHIVVGNGSTIPVTSIGHSKICHPNCSFTL 618

Query: 176 NHILYLPHLIKNLLSVRRFATDNQVSIEFDAF 271
             IL  P +IKNL+SVRRF  DN  S+EFD F
Sbjct: 619 RDILCSPAIIKNLISVRRFVIDNWCSVEFDPF 650


>gb|ABB47203.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1050

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/89 (48%), Positives = 56/89 (62%)
 Frame = +2

Query: 5   WYMDTGATSHMTNNSGILSSYFNNKSFNDITVGDGSRIPIHGSGHTILKPPLPPFKLNHI 184
           W +DTGATSHM++  GIL +   N S+  ITVG+G  IP+   G + L      F L +I
Sbjct: 282 WVLDTGATSHMSSTDGILDTRLPN-SYTFITVGNGHTIPVICHGTSFLPIGTTKFDLKNI 340

Query: 185 LYLPHLIKNLLSVRRFATDNQVSIEFDAF 271
           L  P L++NLLS+R+F  DN  SIEFD F
Sbjct: 341 LVAPSLVRNLLSIRQFTRDNNCSIEFDEF 369