BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056839
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcript...    68   7e-10
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    67   2e-09
gb|ABW81026.1| reverse transcriptase [Arabidopsis lyrata subsp. ...    65   7e-09
dbj|BAB01155.1| unnamed protein product [Arabidopsis thaliana] g...    64   1e-08
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08

>ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcriptase)-related protein
           [Arabidopsis thaliana] gi|332195602|gb|AEE33723.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related protein [Arabidopsis thaliana]
          Length = 289

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
 Frame = -2

Query: 395 RMIAWKDHPPDFSCPFCMQEPDFRDHLFFSCSFPRSVWQ-HMKRCTGLEHLSESWEDVVA 219
           R+ +W  H   F C  C  E + RDHL FSC F   VW+    R    + L  SW ++++
Sbjct: 157 RLASW-GHIQSFDCCLCTIETESRDHLLFSCEFAAQVWRLAFSRLCPRQRLFCSWAELLS 215

Query: 218 EVHWRNAPKTALTILRRLGLAAVVYHVWMERNNRTHHRALHSEKQVFKAAFDKVRLKILG 39
            +  R++  +A ++LR++   A++Y++W +RNN  H+    +   +FK    ++R  I  
Sbjct: 216 WM--RSSSSSAPSLLRKVSAHAIIYNIWRQRNNVLHNNLRIAPIIIFKIVDREIRNIISS 273

Query: 38  LDHR 27
             HR
Sbjct: 274 RYHR 277


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
 Frame = -2

Query: 395  RMIAWKDHPPDFSCPFCMQEPDFRDHLFFSCSFPRSVWQHMKRCTGLEHLSESWEDVVAE 216
            R   W  + P   C  C +E + RDHLF  C+    +WQ +    G   +   W+D+   
Sbjct: 1081 RTTHWSTNRPSLCC-VCQRETETRDHLFIHCTLGSLIWQQVLARFGRSQMFREWKDI--- 1136

Query: 215  VHWRNAPKTALT-ILRRLGLAAVVYHVWMERNNRTHHRALHSEKQVFKAAFDKVRLKIL 42
            + W  + + + +  L++L +   ++H+W ERN+R H     S   +FK     +R  IL
Sbjct: 1137 IEWMLSNQGSFSGTLKKLAVQTAIFHIWKERNSRLHSAMSASHTAIFKQIDRSIRDSIL 1195


>gb|ABW81026.1| reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 181

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/113 (29%), Positives = 60/113 (53%)
 Frame = -2

Query: 395 RMIAWKDHPPDFSCPFCMQEPDFRDHLFFSCSFPRSVWQHMKRCTGLEHLSESWEDVVAE 216
           RMI W  +  D SC FC    + +DH+FF+C + R+VW+ +     L + +E W +++  
Sbjct: 71  RMIKWNQNV-DASCVFCKDSRETKDHMFFNCPYSRTVWKELVSGLLLNNFTEKWLEIMTM 129

Query: 215 VHWRNAPKTALTILRRLGLAAVVYHVWMERNNRTHHRALHSEKQVFKAAFDKV 57
           +  ++  KT   I+R +     ++ +W ERN+R H       +++ K   DK+
Sbjct: 130 LAKKDLDKTKGFIVRYV-FQNTIHSIWRERNDRRHGEQPSPTEKIVK-LIDKI 180


>dbj|BAB01155.1| unnamed protein product [Arabidopsis thaliana]
           gi|49823524|gb|AAT68745.1| hypothetical protein
           At3g17200 [Arabidopsis thaliana]
           gi|60547763|gb|AAX23845.1| hypothetical protein
           At3g17200 [Arabidopsis thaliana]
          Length = 310

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/95 (33%), Positives = 51/95 (53%)
 Frame = -2

Query: 395 RMIAWKDHPPDFSCPFCMQEPDFRDHLFFSCSFPRSVWQHMKRCTGLEHLSESWEDVVAE 216
           RM+ W  H  + SC  C +  + RDHLFF C++ R VW+ + +       S  W+D++  
Sbjct: 170 RMVLWNQHV-NTSCSLCDEPMETRDHLFFVCTYSRKVWEDIAKPILQHRFSLDWKDILNY 228

Query: 215 VHWRNAPKTALTILRRLGLAAVVYHVWMERNNRTH 111
           V  R++ KT   I++ +     ++ VW ERN R H
Sbjct: 229 VCERDSDKTRNFIIKHV-FQNTIHSVWGERNARRH 262


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
 Frame = -2

Query: 374  HPPDFSCPFCMQEPDFRDHLFFSCSFPRSVWQHMKRCTGLEHLSESWEDVV--AEVHWRN 201
            H P+  C  C++  +  +HLFF CS+ +++W  +     +  +++ W++ +  A V W  
Sbjct: 912  HGPN-RCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVSWHG 970

Query: 200  APKTALTILRRLGLAAVVYHVWMERNNR 117
              K+ +   R+L  AA VYHVW ERN R
Sbjct: 971  --KSFINFSRKLSFAATVYHVWQERNAR 996