BLASTX nr result

ID: Atractylodes22_contig00056832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056832
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                               108   5e-22
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   108   6e-22
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]         102   2e-20
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    96   3e-18
emb|CCH50954.1| T1.2 [Malus x robusta]                                 95   7e-18

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  108 bits (270), Expect = 5e-22
 Identities = 55/91 (60%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
 Frame = +3

Query: 60  WRLSAAVPLYKNKSDTHGCGNYSGIKLLGHTQKLWERVIXXXXXXXXXXXXNQFAFMPWR 239
           WR S  VP+YKNK D   C NY GIKL+ HT KLWERVI            NQF FMP R
Sbjct: 616 WRTSTLVPIYKNKGDVQNCMNYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGR 675

Query: 240 STTEAINLRRRLMEKYNEHSKDLH-VFIDLE 329
           ST EAI L RRLME+Y +  KDLH VFIDLE
Sbjct: 676 STMEAIYLLRRLMERYRDGKKDLHMVFIDLE 706


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/91 (60%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
 Frame = +3

Query: 60  WRLSAAVPLYKNKSDTHGCGNYSGIKLLGHTQKLWERVIXXXXXXXXXXXXNQFAFMPWR 239
           WR S  VP+YKNK D   C NY GIKL+ HT KLWERVI            NQF FMP R
Sbjct: 220 WRTSPLVPIYKNKGDVQNCMNYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGR 279

Query: 240 STTEAINLRRRLMEKYNEHSKDLH-VFIDLE 329
           ST EAI L RRLME+Y +  KDLH VFIDLE
Sbjct: 280 STMEAIYLLRRLMERYRDGKKDLHMVFIDLE 310


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/91 (57%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
 Frame = +3

Query: 60  WRLSAAVPLYKNKSDTHGCGNYSGIKLLGHTQKLWERVIXXXXXXXXXXXXNQFAFMPWR 239
           WR S  VP+YKNK D   C NY GIKL+ HT KLWERVI            NQF FM  R
Sbjct: 110 WRKSTLVPIYKNKGDIQSCENYRGIKLMTHTMKLWERVIERGLRKETQVTENQFGFMSGR 169

Query: 240 STTEAINLRRRLMEKYNEHSKDLH-VFIDLE 329
           S TEAI L RR+ME+Y  + +DLH VFIDLE
Sbjct: 170 SITEAIYLLRRMMERYRSNKRDLHMVFIDLE 200


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 49/91 (53%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = +3

Query: 60  WRLSAAVPLYKNKSDTHGCGNYSGIKLLGHTQKLWERVIXXXXXXXXXXXXNQFAFMPWR 239
           WR S  +P+ KNK D   C NY GIKL+ HT KLWERVI            NQF FM  R
Sbjct: 198 WRRSTLIPIDKNKGDIQNCANYRGIKLMSHTMKLWERVIKRRLRKETLVTDNQFGFMLGR 257

Query: 240 STTEAINLRRRLMEKYNEHSKDLH-VFIDLE 329
           ST EAI L +R+ME+Y    KDLH VF DLE
Sbjct: 258 STMEAIYLLQRVMERYRTDKKDLHLVFFDLE 288


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 51/91 (56%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = +3

Query: 60  WRLSAAVPLYKNKSDTHGCGNYSGIKLLGHTQKLWERVIXXXXXXXXXXXXNQFAFMPWR 239
           WR S  VP+YKNK D   C NY GIKL+ HT KL  RVI            NQF FMP  
Sbjct: 239 WRNSTLVPIYKNKGDIQNCMNYRGIKLMSHTMKLLARVIEHRLRQKTRVSDNQFKFMPGC 298

Query: 240 STTEAINLRRRLMEKYNEHSKDLH-VFIDLE 329
           ST EAI L R+LMEKY +   DLH VFIDLE
Sbjct: 299 STMEAIYLLRKLMEKYRDGKNDLHMVFIDLE 329


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