BLASTX nr result

ID: Atractylodes22_contig00056768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056768
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68261.1| hypothetical protein VITISV_004267 [Vitis vinifera]   185   3e-48
emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]   184   7e-48
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...   189   1e-47
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ...   189   1e-47
gb|AAD37020.1| putative retroelement pol polyprotein [Arabidopsi...   189   2e-47

>emb|CAN68261.1| hypothetical protein VITISV_004267 [Vitis vinifera]
          Length = 362

 Score =  185 bits (470), Expect(2) = 3e-48
 Identities = 82/114 (71%), Positives = 97/114 (85%)
 Frame = +1

Query: 1   LYVDEIVARHGVPLSIISDRDAIFTSRFWTSFQREMGTRLNLSTAYHPQTDGQSEQTIQT 180
           LYV EIV  HGVP+SI+SDRD  FTSRFW S Q+ +GT+L+ STA+HPQTDGQSE+ IQ 
Sbjct: 64  LYVKEIVRMHGVPVSIVSDRDPRFTSRFWHSLQKALGTKLSFSTAFHPQTDGQSERVIQV 123

Query: 181 LEDMLRACVIDFGGNWDSHLPLVEFAYNNSYHSSIQAAPFEALYGRKCRTPVCW 342
           LED+LRAC++D  GNWD HLPLVEFAYNNS+ +SI  APFEALYGRKCR+P+CW
Sbjct: 124 LEDLLRACILDLQGNWDDHLPLVEFAYNNSFQASIGMAPFEALYGRKCRSPICW 177



 Score = 31.6 bits (70), Expect(2) = 3e-48
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +3

Query: 342 DDIGERQLAGPELVQQTSNKI 404
           +D+GER+L GPELVQ T  K+
Sbjct: 178 NDVGERKLLGPELVQLTVEKV 198


>emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]
          Length = 984

 Score =  184 bits (467), Expect(2) = 7e-48
 Identities = 81/114 (71%), Positives = 96/114 (84%)
 Frame = +1

Query: 1    LYVDEIVARHGVPLSIISDRDAIFTSRFWTSFQREMGTRLNLSTAYHPQTDGQSEQTIQT 180
            LYV EIV  HGVP+SI+SDRD  FTSRFW S Q+ +GT+L+ STA+HPQTDGQSE+ IQ 
Sbjct: 674  LYVKEIVRMHGVPVSIVSDRDPRFTSRFWHSLQKSLGTKLSFSTAFHPQTDGQSERVIQV 733

Query: 181  LEDMLRACVIDFGGNWDSHLPLVEFAYNNSYHSSIQAAPFEALYGRKCRTPVCW 342
            LED+ RAC++D  GNWD HLPLVEFAYNNS+ +SI  APFEALYGRKCR+P+CW
Sbjct: 734  LEDLFRACILDLQGNWDDHLPLVEFAYNNSFQASIGMAPFEALYGRKCRSPICW 787



 Score = 31.6 bits (70), Expect(2) = 7e-48
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +3

Query: 342 DDIGERQLAGPELVQQTSNKI 404
           +D+GER+L GPELVQ T  K+
Sbjct: 788 NDVGERKLLGPELVQLTVEKV 808


>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score =  189 bits (481), Expect(2) = 1e-47
 Identities = 84/114 (73%), Positives = 102/114 (89%)
 Frame = +1

Query: 1    LYVDEIVARHGVPLSIISDRDAIFTSRFWTSFQREMGTRLNLSTAYHPQTDGQSEQTIQT 180
            LY+ EIV  HGVP+SIISDR A FT++FW SFQ+ +G++++LSTA+HPQTDGQ+E+TIQT
Sbjct: 1295 LYIQEIVRLHGVPISIISDRGAQFTAQFWKSFQKGLGSKVSLSTAFHPQTDGQAERTIQT 1354

Query: 181  LEDMLRACVIDFGGNWDSHLPLVEFAYNNSYHSSIQAAPFEALYGRKCRTPVCW 342
            LEDMLRACVIDF  NWD HLPL+EFAYNNSYHSSIQ AP+EALYGR+CR+P+ W
Sbjct: 1355 LEDMLRACVIDFKSNWDDHLPLIEFAYNNSYHSSIQMAPYEALYGRRCRSPIGW 1408



 Score = 25.4 bits (54), Expect(2) = 1e-47
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 345  DIGERQLAGPELVQQTSNKI 404
            ++GE +L GP+LV Q   K+
Sbjct: 1410 EVGEARLIGPDLVHQAMEKV 1429


>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1515

 Score =  189 bits (481), Expect(2) = 1e-47
 Identities = 84/114 (73%), Positives = 102/114 (89%)
 Frame = +1

Query: 1    LYVDEIVARHGVPLSIISDRDAIFTSRFWTSFQREMGTRLNLSTAYHPQTDGQSEQTIQT 180
            LY+ EIV  HGVP+SIISDR A FT++FW SFQ+ +G++++LSTA+HPQTDGQ+E+TIQT
Sbjct: 1289 LYIQEIVRLHGVPISIISDRGAQFTAQFWKSFQKGLGSKVSLSTAFHPQTDGQAERTIQT 1348

Query: 181  LEDMLRACVIDFGGNWDSHLPLVEFAYNNSYHSSIQAAPFEALYGRKCRTPVCW 342
            LEDMLRACVIDF  NWD HLPL+EFAYNNSYHSSIQ AP+EALYGR+CR+P+ W
Sbjct: 1349 LEDMLRACVIDFKSNWDDHLPLIEFAYNNSYHSSIQMAPYEALYGRRCRSPIGW 1402



 Score = 25.4 bits (54), Expect(2) = 1e-47
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 345  DIGERQLAGPELVQQTSNKI 404
            ++GE +L GP+LV Q   K+
Sbjct: 1404 EVGEARLIGPDLVHQAMEKV 1423


>gb|AAD37020.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 949

 Score =  189 bits (481), Expect(2) = 2e-47
 Identities = 81/114 (71%), Positives = 102/114 (89%)
 Frame = +1

Query: 4    YVDEIVARHGVPLSIISDRDAIFTSRFWTSFQREMGTRLNLSTAYHPQTDGQSEQTIQTL 183
            Y+DEI+  HG+P+SI+SDRD  FTS+FW +FQ+ +GTR+NLSTAYHPQTDGQSE+TIQTL
Sbjct: 675  YIDEIMRLHGIPVSIVSDRDTRFTSKFWNAFQKALGTRVNLSTAYHPQTDGQSERTIQTL 734

Query: 184  EDMLRACVIDFGGNWDSHLPLVEFAYNNSYHSSIQAAPFEALYGRKCRTPVCWT 345
            EDMLRACV+D+GGNW+ +L L+EFAYNNS+ +SI  +P+EALYGR CRTP+CWT
Sbjct: 735  EDMLRACVLDWGGNWEKYLRLIEFAYNNSFQASIGMSPYEALYGRACRTPLCWT 788



 Score = 24.3 bits (51), Expect(2) = 2e-47
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +3

Query: 348 IGERQLAGPELVQQTSNKI 404
           +GER+L GP +V +T+ ++
Sbjct: 790 VGERRLFGPTIVDETTERM 808


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