BLASTX nr result

ID: Atractylodes22_contig00056739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056739
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510791.1| pentatricopeptide repeat-containing protein,...   149   3e-34
emb|CBI22748.3| unnamed protein product [Vitis vinifera]              148   4e-34
ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containi...   148   4e-34
ref|XP_004157226.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_004140840.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32

>ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549906|gb|EEF51393.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 475

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/108 (62%), Positives = 85/108 (78%)
 Frame = +3

Query: 9   RASFVRNAKTGAAKAVNVLQQDGPGFDAKTGLDNLEIQVSGLLVREVLIGILKNINHANR 188
           R  F  N +  AA+ +++L+QDGPGFDAK  L  L+++VSGLLVREVL GIL+NI   N+
Sbjct: 71  RKWFFENVRIDAARVLDILRQDGPGFDAKAALSELDLRVSGLLVREVLAGILRNIGIDNK 130

Query: 189 ERCAKLGYKFFVWSGQKENYNHTVHTYHLIMQIFAKSEEYKAMWRLVD 332
            RCAKLGYKFF+WS Q+ENY HT + YHLIM+IFA  EE+KAMWRL+D
Sbjct: 131 TRCAKLGYKFFIWSSQQENYRHTANNYHLIMKIFADCEEFKAMWRLLD 178


>emb|CBI22748.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  148 bits (374), Expect = 4e-34
 Identities = 67/102 (65%), Positives = 85/102 (83%)
 Frame = +3

Query: 27  NAKTGAAKAVNVLQQDGPGFDAKTGLDNLEIQVSGLLVREVLIGILKNINHANRERCAKL 206
           N +  A++ + +LQQD PGF  K  LD L+I+VSG LVREVL+ ILK +N+ N+ERCAKL
Sbjct: 116 NMRLDASRVLQILQQDCPGFSTKAALDELQIRVSGGLVREVLLEILKTVNYTNKERCAKL 175

Query: 207 GYKFFVWSGQKENYNHTVHTYHLIMQIFAKSEEYKAMWRLVD 332
           GYKFF+WSGQ+ENY HTV+ YHLIM+IFA+S+E+KAMWRLVD
Sbjct: 176 GYKFFMWSGQQENYRHTVNAYHLIMKIFAESDEFKAMWRLVD 217


>ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Vitis vinifera]
          Length = 514

 Score =  148 bits (374), Expect = 4e-34
 Identities = 67/102 (65%), Positives = 85/102 (83%)
 Frame = +3

Query: 27  NAKTGAAKAVNVLQQDGPGFDAKTGLDNLEIQVSGLLVREVLIGILKNINHANRERCAKL 206
           N +  A++ + +LQQD PGF  K  LD L+I+VSG LVREVL+ ILK +N+ N+ERCAKL
Sbjct: 112 NMRLDASRVLQILQQDCPGFSTKAALDELQIRVSGGLVREVLLEILKTVNYTNKERCAKL 171

Query: 207 GYKFFVWSGQKENYNHTVHTYHLIMQIFAKSEEYKAMWRLVD 332
           GYKFF+WSGQ+ENY HTV+ YHLIM+IFA+S+E+KAMWRLVD
Sbjct: 172 GYKFFMWSGQQENYRHTVNAYHLIMKIFAESDEFKAMWRLVD 213


>ref|XP_004157226.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Cucumis sativus]
          Length = 476

 Score =  142 bits (357), Expect = 4e-32
 Identities = 64/108 (59%), Positives = 88/108 (81%)
 Frame = +3

Query: 9   RASFVRNAKTGAAKAVNVLQQDGPGFDAKTGLDNLEIQVSGLLVREVLIGILKNINHANR 188
           R SF+++AK  A K + +L+QDGPGFD    LD L+++VSG+LV EVL GILK+ +  N+
Sbjct: 68  RRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 127

Query: 189 ERCAKLGYKFFVWSGQKENYNHTVHTYHLIMQIFAKSEEYKAMWRLVD 332
            +CAKLGYKFF+WSG+ ENY HTV++YH+IM+IFA+ EE+KAMWR++D
Sbjct: 128 TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLD 175


>ref|XP_004140840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Cucumis sativus]
          Length = 476

 Score =  142 bits (357), Expect = 4e-32
 Identities = 64/108 (59%), Positives = 88/108 (81%)
 Frame = +3

Query: 9   RASFVRNAKTGAAKAVNVLQQDGPGFDAKTGLDNLEIQVSGLLVREVLIGILKNINHANR 188
           R SF+++AK  A K + +L+QDGPGFD    LD L+++VSG+LV EVL GILK+ +  N+
Sbjct: 68  RRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 127

Query: 189 ERCAKLGYKFFVWSGQKENYNHTVHTYHLIMQIFAKSEEYKAMWRLVD 332
            +CAKLGYKFF+WSG+ ENY HTV++YH+IM+IFA+ EE+KAMWR++D
Sbjct: 128 TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLD 175


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