BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056729
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    81   8e-14
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    77   1e-12
emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]    76   3e-12
gb|AAF79797.1|AC020646_20 T32E20.30 [Arabidopsis thaliana]             70   2e-10
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...    67   2e-09

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
 Frame = +2

Query: 2    PFAIVAKVGQVSYKLKLPVLSKVHPVFHISQLKKAVGEYHIEANLPEGLAVEEDD--VEE 175
            P+ + A+VG V+YKLKLP  S+VH VFH+S LKKAVG YH E NLP+   +EED   V E
Sbjct: 1150 PYPVEARVGAVAYKLKLPEGSRVHSVFHVSLLKKAVGNYHEEENLPD---LEEDKGVVIE 1206

Query: 176  PERTLDVREVLLEGKLQLQFLIQWKGR 256
            PE  L  R + ++G+   Q L+ W G+
Sbjct: 1207 PETVLTRRTIQVQGEKIDQVLVHWMGQ 1233


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/84 (42%), Positives = 54/84 (64%)
 Frame = +2

Query: 2    PFAIVAKVGQVSYKLKLPVLSKVHPVFHISQLKKAVGEYHIEANLPEGLAVEEDDVEEPE 181
            PF ++ ++G  +YKL+LP  SK+HPVFH+S LKK VG   +   +P  + V+ + V EPE
Sbjct: 1484 PFTVLQRIGATAYKLQLPPSSKIHPVFHVSLLKKVVGNTPVLPTIPPHIDVDMELVVEPE 1543

Query: 182  RTLDVREVLLEGKLQLQFLIQWKG 253
              LDVR++    +   + LI+WKG
Sbjct: 1544 ELLDVRQIRQGKQTFTECLIKWKG 1567


>emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]
          Length = 1003

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 38/83 (45%), Positives = 51/83 (61%)
 Frame = +2

Query: 2   PFAIVAKVGQVSYKLKLPVLSKVHPVFHISQLKKAVGEYHIEANLPEGLAVEEDDVEEPE 181
           PF I A+VG V+Y+L LP  S +HP+FHISQL+KAVG     ++LP  L  E + + EP 
Sbjct: 689 PFPIEARVGMVAYRLTLPPSSTIHPMFHISQLRKAVGTAPTSSSLPSQLTAEMELLVEPR 748

Query: 182 RTLDVREVLLEGKLQLQFLIQWK 250
             L VR+ L       + L+QWK
Sbjct: 749 TILGVRQCLTGSTFVTEVLVQWK 771


>gb|AAF79797.1|AC020646_20 T32E20.30 [Arabidopsis thaliana]
          Length = 1397

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/84 (44%), Positives = 55/84 (65%)
 Frame = +2

Query: 2    PFAIVAKVGQVSYKLKLPVLSKVHPVFHISQLKKAVGEYHIEANLPEGLAVEEDDVEEPE 181
            PF I+ ++G+V+Y+LKLP  SK+H VFH+SQLK+ +G++H    LPE L  + + V  PE
Sbjct: 1276 PFEIMERIGKVAYRLKLPEGSKIHLVFHVSQLKQVLGDHHQVIPLPEVLTADNEFVVVPE 1335

Query: 182  RTLDVREVLLEGKLQLQFLIQWKG 253
              L+ R    E  L L+ L+ W+G
Sbjct: 1336 AVLETR--YNEDGL-LEALVHWQG 1356


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/87 (40%), Positives = 54/87 (62%)
 Frame = +2

Query: 2    PFAIVAKVGQVSYKLKLPVLSKVHPVFHISQLKKAVGEYHIEANLPEGLAVEEDDVEEPE 181
            PF ++ ++GQV+YKL+LP  S +HPVFH+SQLK+AV        LP+ L+   +    PE
Sbjct: 1510 PFKVLHRIGQVAYKLQLPEHSTIHPVFHVSQLKRAVPPSFTPQELPKILSPTLEWNTGPE 1569

Query: 182  RTLDVREVLLEGKLQLQFLIQWKGRSS 262
            + LD+R+       ++  L+QW G S+
Sbjct: 1570 KLLDIRQSNTNSGPEV--LVQWSGLST 1594