BLASTX nr result

ID: Atractylodes22_contig00056727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056727
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22967.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-li...    56   3e-06

>emb|CBI22967.3| unnamed protein product [Vitis vinifera]
          Length = 1281

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
 Frame = +2

Query: 2    FHVRLLT-NVPRPEVQLRSSNKRAKS---------QMERRKENQAPAIGXXXXXXXXXXX 151
            F+++LL  +  R EVQLRS+ KRAKS         + ++ +    P +            
Sbjct: 1184 FYIKLLNRDKRREEVQLRSTKKRAKSPTKKECTKGKRDKSEIENRPPVSSSSTTALQPQP 1243

Query: 152  XXXXXIKLGKVVGVRCTPEAKRRRRSRLVDP 244
                 +KLGK+  +RCTPE KRRRRSR+ +P
Sbjct: 1244 NCKFSVKLGKINPIRCTPERKRRRRSRIAEP 1274


>ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-like [Vitis vinifera]
          Length = 666

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
 Frame = +2

Query: 2   FHVRLLT-NVPRPEVQLRSSNKRAKS---------QMERRKENQAPAIGXXXXXXXXXXX 151
           F+++LL  +  R EVQLRS+ KRAKS         + ++ +    P +            
Sbjct: 569 FYIKLLNRDKRREEVQLRSTKKRAKSPTKKECTKGKRDKSEIENRPPVSSSSTTALQPQP 628

Query: 152 XXXXXIKLGKVVGVRCTPEAKRRRRSRLVDP 244
                +KLGK+  +RCTPE KRRRRSR+ +P
Sbjct: 629 NCKFSVKLGKINPIRCTPERKRRRRSRIAEP 659


Top