BLASTX nr result

ID: Atractylodes22_contig00056724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056724
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
gb|AFK47126.1| unknown [Medicago truncatula]                          166   2e-39
ref|XP_003630737.1| Pentatricopeptide repeat-containing protein ...   166   2e-39

>ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
           [Vitis vinifera] gi|297738768|emb|CBI28013.3| unnamed
           protein product [Vitis vinifera]
          Length = 479

 Score =  182 bits (462), Expect = 2e-44
 Identities = 81/105 (77%), Positives = 94/105 (89%)
 Frame = +2

Query: 2   EHYGCMVDLLGRCGLLEEAREMVEEMPMEANVVIWGSLMGGCEKYGNVKMGEWVAKHLQE 181
           +HYGCMVDLLGR GLLEEAR+MVE MPM+ANV++WG LMG CEKYGNVKMGEWVA+HL E
Sbjct: 370 QHYGCMVDLLGRAGLLEEARKMVERMPMKANVIVWGCLMGACEKYGNVKMGEWVAEHLLE 429

Query: 182 LEPWNDGVYVVLSNIYAANGLWEDVGRMRRIMKERRLAKIPGYSL 316
           LEPWNDGV+VVLSNIYA+ GLW +V R+R +MKER+L K+P YSL
Sbjct: 430 LEPWNDGVFVVLSNIYASRGLWREVERVRGVMKERKLDKVPAYSL 474


>ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cucumis sativus]
          Length = 614

 Score =  179 bits (454), Expect = 2e-43
 Identities = 77/104 (74%), Positives = 93/104 (89%)
 Frame = +2

Query: 5   HYGCMVDLLGRCGLLEEAREMVEEMPMEANVVIWGSLMGGCEKYGNVKMGEWVAKHLQEL 184
           HYGCMVDLL + GLLEEAR M+EEMPM+AN +IWG L+GGCEK+GNV++GEW  KHLQEL
Sbjct: 506 HYGCMVDLLSKAGLLEEARRMIEEMPMKANSIIWGCLIGGCEKHGNVEIGEWAGKHLQEL 565

Query: 185 EPWNDGVYVVLSNIYAANGLWEDVGRMRRIMKERRLAKIPGYSL 316
           EPWNDGVYVVLSNIYA NG+W++  +MR +MK+R+LAK+PGYSL
Sbjct: 566 EPWNDGVYVVLSNIYATNGMWKEAQKMRDVMKQRQLAKVPGYSL 609


>ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cucumis sativus]
          Length = 609

 Score =  179 bits (454), Expect = 2e-43
 Identities = 77/104 (74%), Positives = 93/104 (89%)
 Frame = +2

Query: 5   HYGCMVDLLGRCGLLEEAREMVEEMPMEANVVIWGSLMGGCEKYGNVKMGEWVAKHLQEL 184
           HYGCMVDLL + GLLEEAR M+EEMPM+AN +IWG L+GGCEK+GNV++GEW  KHLQEL
Sbjct: 501 HYGCMVDLLSKAGLLEEARRMIEEMPMKANSIIWGCLIGGCEKHGNVEIGEWAGKHLQEL 560

Query: 185 EPWNDGVYVVLSNIYAANGLWEDVGRMRRIMKERRLAKIPGYSL 316
           EPWNDGVYVVLSNIYA NG+W++  +MR +MK+R+LAK+PGYSL
Sbjct: 561 EPWNDGVYVVLSNIYATNGMWKEAQKMRDVMKQRQLAKVPGYSL 604


>gb|AFK47126.1| unknown [Medicago truncatula]
          Length = 447

 Score =  166 bits (420), Expect = 2e-39
 Identities = 75/105 (71%), Positives = 88/105 (83%)
 Frame = +2

Query: 2   EHYGCMVDLLGRCGLLEEAREMVEEMPMEANVVIWGSLMGGCEKYGNVKMGEWVAKHLQE 181
           +HYGCMVDLLGR GL ++AR MVEEMPM+ N V+WG LMG CEK+GNV M EWVA++LQ 
Sbjct: 338 QHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQA 397

Query: 182 LEPWNDGVYVVLSNIYAANGLWEDVGRMRRIMKERRLAKIPGYSL 316
           LEPWN+GVYVVLSNIYA  GLW++V R+R  MKE RLAKIP YS+
Sbjct: 398 LEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEGRLAKIPAYSI 442


>ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524759|gb|AET05213.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 447

 Score =  166 bits (420), Expect = 2e-39
 Identities = 75/105 (71%), Positives = 88/105 (83%)
 Frame = +2

Query: 2   EHYGCMVDLLGRCGLLEEAREMVEEMPMEANVVIWGSLMGGCEKYGNVKMGEWVAKHLQE 181
           +HYGCMVDLLGR GL ++AR MVEEMPM+ N V+WG LMG CEK+GNV M EWVA++LQ 
Sbjct: 338 QHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQA 397

Query: 182 LEPWNDGVYVVLSNIYAANGLWEDVGRMRRIMKERRLAKIPGYSL 316
           LEPWN+GVYVVLSNIYA  GLW++V R+R  MKE RLAKIP YS+
Sbjct: 398 LEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEGRLAKIPAYSI 442


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