BLASTX nr result

ID: Atractylodes22_contig00056639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056639
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR67407.1| integrase [Cucumis melo subsp. melo]                   141   6e-32
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   135   5e-30
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi...   121   5e-26
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   121   5e-26
emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]   120   2e-25

>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
          Length = 1281

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/95 (68%), Positives = 77/95 (81%)
 Frame = +3

Query: 3   KPLELVHSDICGPMRTMSIGGSRYFLTFIDDYSRKVWIYFLEEK*ETFNCFVSFKTFVEN 182
           KPLEL+H+D+CGPMRT + GG+RYF+TFIDD+SRK+WIYFL+EK E   CF SFK F EN
Sbjct: 487 KPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTEN 546

Query: 183 QSDHKIKCLRSDRGGEYVGLDMQNFLKESGIHHQL 287
           QS +KIK LRSDRGGEY+     NF KE GIHHQ+
Sbjct: 547 QSGYKIKTLRSDRGGEYIVFG--NFFKEQGIHHQM 579


>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101216349 [Cucumis sativus]
          Length = 1830

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/94 (68%), Positives = 76/94 (80%)
 Frame = +3

Query: 3   KPLELVHSDICGPMRTMSIGGSRYFLTFIDDYSRKVWIYFLEEK*ETFNCFVSFKTFVEN 182
           KPLELVH+D+CGPMRT + GG+RYFLTFIDDYSRK WIY L+EK  TF CF +FK  VEN
Sbjct: 496 KPLELVHTDLCGPMRTTTHGGNRYFLTFIDDYSRKTWIYLLKEKSATFECFKTFKAMVEN 555

Query: 183 QSDHKIKCLRSDRGGEYVGLDMQNFLKESGIHHQ 284
           +S+ K+K LRSDRGGEY+     +FLKE+GI HQ
Sbjct: 556 ESNLKLKSLRSDRGGEYI--VFADFLKENGIKHQ 587


>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1499

 Score =  121 bits (304), Expect = 5e-26
 Identities = 55/95 (57%), Positives = 71/95 (74%)
 Frame = +3

Query: 3   KPLELVHSDICGPMRTMSIGGSRYFLTFIDDYSRKVWIYFLEEK*ETFNCFVSFKTFVEN 182
           K LEL+HSD+CGPM+T SI GSRYFLTFIDD+SR  W+YFL+ K E    F  FK +VEN
Sbjct: 514 KTLELIHSDVCGPMQTESINGSRYFLTFIDDFSRMTWVYFLKNKSEVITKFKIFKPYVEN 573

Query: 183 QSDHKIKCLRSDRGGEYVGLDMQNFLKESGIHHQL 287
           QS+ +IK LR+D GGE++  +     +ESGIHH++
Sbjct: 574 QSESRIKRLRTDGGGEFLSREFIKLCQESGIHHEI 608


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/93 (61%), Positives = 70/93 (75%)
 Frame = +3

Query: 9   LELVHSDICGPMRTMSIGGSRYFLTFIDDYSRKVWIYFLEEK*ETFNCFVSFKTFVENQS 188
           LELVH+D+CGPM+  S+GGSRYFL F DDYSR  W+YFL+ K ETF  F  FK FVENQS
Sbjct: 503 LELVHADLCGPMKMESLGGSRYFLMFTDDYSRFSWVYFLKFKSETFETFKKFKAFVENQS 562

Query: 189 DHKIKCLRSDRGGEYVGLDMQNFLKESGIHHQL 287
            +KIK LR+DRGGE++  D   F +E+GI  +L
Sbjct: 563 GNKIKSLRTDRGGEFLSNDFNLFCEENGIRREL 595


>emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]
          Length = 808

 Score =  120 bits (300), Expect = 2e-25
 Identities = 57/95 (60%), Positives = 66/95 (69%)
 Frame = +3

Query: 3   KPLELVHSDICGPMRTMSIGGSRYFLTFIDDYSRKVWIYFLEEK*ETFNCFVSFKTFVEN 182
           K LELVHSDICGP+   S GG RYF+TFIDDYSRK W+YFL+EK E F+ F SFK  VE 
Sbjct: 38  KVLELVHSDICGPINPTSNGGKRYFITFIDDYSRKTWVYFLQEKSEAFSTFKSFKMLVEK 97

Query: 183 QSDHKIKCLRSDRGGEYVGLDMQNFLKESGIHHQL 287
           ++   IK  RSDRGGEY   +  NF +  GI  QL
Sbjct: 98  EAGKPIKIFRSDRGGEYTSQEFVNFCENHGIQKQL 132


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