BLASTX nr result

ID: Atractylodes22_contig00056625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056625
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274379.2| PREDICTED: putative COX1/OXI3 intron 2 prote...    95   5e-18
emb|CBI30076.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002308907.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|NP_001154695.1| RNA-directed DNA polymerase (reverse transcr...    86   4e-15
ref|NP_196025.5| RNA-directed DNA polymerase (reverse transcript...    86   4e-15

>ref|XP_002274379.2| PREDICTED: putative COX1/OXI3 intron 2 protein-like [Vitis
           vinifera]
          Length = 757

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   NIYLNVLDQRLQELRLLINKENRRSDEGND-DGDHVFYKPLKIYAVRYLDEILVITSGSK 177
           N+Y N  D+ +Q+LR+  N+EN R D      G  VFYKP+KIYAVRYLDEILVITSGSK
Sbjct: 253 NVYFNGFDKEIQDLRIRTNQENPRFDSNEVLSGSSVFYKPVKIYAVRYLDEILVITSGSK 312

Query: 178 GLTMSLKNRVVQFVENNLGLQV 243
            LTM LKN+V++F+E  L L+V
Sbjct: 313 MLTMDLKNQVMKFLEGKLELKV 334


>emb|CBI30076.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   NIYLNVLDQRLQELRLLINKENRRSDEGND-DGDHVFYKPLKIYAVRYLDEILVITSGSK 177
           N+Y N  D+ +Q+LR+  N+EN R D      G  VFYKP+KIYAVRYLDEILVITSGSK
Sbjct: 229 NVYFNGFDKEIQDLRIRTNQENPRFDSNEVLSGSSVFYKPVKIYAVRYLDEILVITSGSK 288

Query: 178 GLTMSLKNRVVQFVENNLGLQV 243
            LTM LKN+V++F+E  L L+V
Sbjct: 289 MLTMDLKNQVMKFLEGKLELKV 310


>ref|XP_002308907.1| predicted protein [Populus trichocarpa] gi|222854883|gb|EEE92430.1|
           predicted protein [Populus trichocarpa]
          Length = 787

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   NIYLNVLDQRLQELRLLINKENRRSDEGN-DDGDHVFYKPLKIYAVRYLDEILVITSGSK 177
           N+Y N  D+ +QE+RL ++KEN + D+    +G    YKPLK+YAVRYLDEILVITSGSK
Sbjct: 283 NVYFNGFDREIQEMRLRMSKENPKLDQNEIGEGSSSSYKPLKMYAVRYLDEILVITSGSK 342

Query: 178 GLTMSLKNRVVQFVENNLGLQV 243
            LTM+LK  V++F+E  L L V
Sbjct: 343 MLTMNLKKWVLKFLEGELELNV 364


>ref|NP_001154695.1| RNA-directed DNA polymerase (reverse transcriptase) [Arabidopsis
           thaliana] gi|332003308|gb|AED90691.1| RNA-directed DNA
           polymerase (reverse transcriptase) [Arabidopsis
           thaliana]
          Length = 695

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/82 (53%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   NIYLNVLDQRLQELRLLINKENRRSDEGNDDGD-HVFYKPLKIYAVRYLDEILVITSGSK 177
           N+Y + LD+ +Q+LRL +  +N R   G+++   +VF+KP+ IYAVRYLDEILVITSGSK
Sbjct: 254 NVYFDGLDKEIQDLRLKMKVKNPRVGTGDEESTGNVFFKPVNIYAVRYLDEILVITSGSK 313

Query: 178 GLTMSLKNRVVQFVENNLGLQV 243
            LTM LK R+V  +E  L L+V
Sbjct: 314 MLTMDLKKRIVDILEQRLELRV 335


>ref|NP_196025.5| RNA-directed DNA polymerase (reverse transcriptase) [Arabidopsis
           thaliana] gi|332003307|gb|AED90690.1| RNA-directed DNA
           polymerase (reverse transcriptase) [Arabidopsis
           thaliana]
          Length = 600

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/82 (53%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   NIYLNVLDQRLQELRLLINKENRRSDEGNDDGD-HVFYKPLKIYAVRYLDEILVITSGSK 177
           N+Y + LD+ +Q+LRL +  +N R   G+++   +VF+KP+ IYAVRYLDEILVITSGSK
Sbjct: 254 NVYFDGLDKEIQDLRLKMKVKNPRVGTGDEESTGNVFFKPVNIYAVRYLDEILVITSGSK 313

Query: 178 GLTMSLKNRVVQFVENNLGLQV 243
            LTM LK R+V  +E  L L+V
Sbjct: 314 MLTMDLKKRIVDILEQRLELRV 335


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