BLASTX nr result

ID: Atractylodes22_contig00056546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056546
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    90   2e-16
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...    88   6e-16
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    85   7e-15
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    83   3e-14

>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/93 (49%), Positives = 64/93 (68%)
 Frame = -2

Query: 283  FLGVPLISGRLKSHECKPLVDKVRRRIQNCKSKFLTFAGRLQLIHSVLSFIQVYWCSVLS 104
            +LG+PL++ R+   +  PLV+K+R RI +  ++FL+FAGRLQLI SVLS I  +W SV  
Sbjct: 918  YLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFR 977

Query: 103  LPSSVIHEIEKMFWGFL*SQGELCMGHAKVAWN 5
            LP + + EIEKMF  FL S  +L    AK+AW+
Sbjct: 978  LPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWS 1010


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/93 (45%), Positives = 63/93 (67%)
 Frame = -2

Query: 283 FLGVPLISGRLKSHECKPLVDKVRRRIQNCKSKFLTFAGRLQLIHSVLSFIQVYWCSVLS 104
           +LG+PL+ GRL+S +C PL+ ++  RI++  ++ L+FAGRLQL+ SVL  +QVYW SV  
Sbjct: 38  YLGLPLLFGRLQSCDCDPLIQRITSRIRSWSARVLSFAGRLQLVRSVLRSLQVYWASVFM 97

Query: 103 LPSSVIHEIEKMFWGFL*SQGELCMGHAKVAWN 5
           LP  V  +++K+   +L    E   G AKVAW+
Sbjct: 98  LPMKVHRDVDKILRSYLWRGKEEGRGGAKVAWD 130


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/93 (46%), Positives = 64/93 (68%)
 Frame = -2

Query: 283 FLGVPLISGRLKSHECKPLVDKVRRRIQNCKSKFLTFAGRLQLIHSVLSFIQVYWCSVLS 104
           +LGVPL+S RLK+  CK LVD++  ++++   + L++AGR+QLI+SVL  IQVYW S+  
Sbjct: 58  YLGVPLLSSRLKAIYCKGLVDRITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFL 117

Query: 103 LPSSVIHEIEKMFWGFL*SQGELCMGHAKVAWN 5
           LP  VI  +E++   FL S  ++    AKVAW+
Sbjct: 118 LPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWD 150


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/93 (44%), Positives = 65/93 (69%)
 Frame = -2

Query: 283  FLGVPLISGRLKSHECKPLVDKVRRRIQNCKSKFLTFAGRLQLIHSVLSFIQVYWCSVLS 104
            +LG+PL++ R+   +C PL++K+R RI + K++FL++AGRLQL++SV+S +  +W S   
Sbjct: 1026 YLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFR 1085

Query: 103  LPSSVIHEIEKMFWGFL*SQGELCMGHAKVAWN 5
            LP + I EIE++   FL S  +L    AKVAW+
Sbjct: 1086 LPRACIREIEQISAAFLWSGTDLNPHKAKVAWH 1118


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/93 (45%), Positives = 62/93 (66%)
 Frame = -2

Query: 283  FLGVPLISGRLKSHECKPLVDKVRRRIQNCKSKFLTFAGRLQLIHSVLSFIQVYWCSVLS 104
            +LG+PLI+ RL + +C PL+++VR+RI +  S+FL++AGRL LI SVL  I  +W +   
Sbjct: 771  YLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFR 830

Query: 103  LPSSVIHEIEKMFWGFL*SQGELCMGHAKVAWN 5
            LP   I E+EKM   FL S  E+    AK++W+
Sbjct: 831  LPRKCIRELEKMCSAFLWSGTEMNSNKAKISWH 863


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