BLASTX nr result

ID: Atractylodes22_contig00056535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056535
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002868528.1| EMB2656 [Arabidopsis lyrata subsp. lyrata] g...   102   2e-20
emb|CAN81666.1| hypothetical protein VITISV_023751 [Vitis vinifera]   102   2e-20
ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Viti...   102   4e-20
emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]   102   4e-20
ref|NP_198579.2| condensin complex subunit 3 [Arabidopsis thalia...   101   5e-20

>ref|XP_002868528.1| EMB2656 [Arabidopsis lyrata subsp. lyrata]
           gi|297314364|gb|EFH44787.1| EMB2656 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1050

 Score =  102 bits (255), Expect = 2e-20
 Identities = 48/79 (60%), Positives = 60/79 (75%)
 Frame = +3

Query: 6   DCDAFFEQFLRFLIXXXXXXXXXXXXXXCQIISEIIMRLPDDAEVSNELWDEVIDCIKVR 185
           DCD F E+FLRFL+              CQIISEII+RLPD+ EV++ELWD+VIDC+ +R
Sbjct: 106 DCDEFLEEFLRFLVVGSVAANRNARFRACQIISEIILRLPDEVEVADELWDDVIDCMMLR 165

Query: 186 VGDKVPLIRTFSVRALSRF 242
           V DKVP+IRTF+VR+LSRF
Sbjct: 166 VRDKVPVIRTFAVRSLSRF 184


>emb|CAN81666.1| hypothetical protein VITISV_023751 [Vitis vinifera]
          Length = 934

 Score =  102 bits (255), Expect = 2e-20
 Identities = 51/81 (62%), Positives = 60/81 (74%), Gaps = 3/81 (3%)
 Frame = +3

Query: 9   CD---AFFEQFLRFLIXXXXXXXXXXXXXXCQIISEIIMRLPDDAEVSNELWDEVIDCIK 179
           CD   AF E+F RFL+              CQ+ISEIIMRLPDDAEVSNELWDEVI+C+K
Sbjct: 83  CDSTTAFLEEFFRFLLNAATAANRTARFRACQMISEIIMRLPDDAEVSNELWDEVIECMK 142

Query: 180 VRVGDKVPLIRTFSVRALSRF 242
           +RVGDKVPL+R  +VRAL+RF
Sbjct: 143 LRVGDKVPLVRALAVRALARF 163


>ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Vitis vinifera]
           gi|297745068|emb|CBI38660.3| unnamed protein product
           [Vitis vinifera]
          Length = 1036

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/81 (61%), Positives = 60/81 (74%), Gaps = 3/81 (3%)
 Frame = +3

Query: 9   CD---AFFEQFLRFLIXXXXXXXXXXXXXXCQIISEIIMRLPDDAEVSNELWDEVIDCIK 179
           CD   AF E+F RFL+              CQ+ISEIIMRLPDDAEVSNELWDEVI+C++
Sbjct: 83  CDSTTAFLEEFFRFLVNAATAANKTARFRACQMISEIIMRLPDDAEVSNELWDEVIECMR 142

Query: 180 VRVGDKVPLIRTFSVRALSRF 242
           +RVGDKVPL+R  +VRAL+RF
Sbjct: 143 LRVGDKVPLVRALAVRALARF 163


>emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]
          Length = 862

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/81 (61%), Positives = 60/81 (74%), Gaps = 3/81 (3%)
 Frame = +3

Query: 9   CD---AFFEQFLRFLIXXXXXXXXXXXXXXCQIISEIIMRLPDDAEVSNELWDEVIDCIK 179
           CD   AF E+F RFL+              CQ+ISEIIMRLPDDAEVSNELWDEVI+C++
Sbjct: 83  CDSTTAFLEEFFRFLVNAATAANKTARFRACQMISEIIMRLPDDAEVSNELWDEVIECMR 142

Query: 180 VRVGDKVPLIRTFSVRALSRF 242
           +RVGDKVPL+R  +VRAL+RF
Sbjct: 143 LRVGDKVPLVRALAVRALARF 163


>ref|NP_198579.2| condensin complex subunit 3 [Arabidopsis thaliana]
           gi|332006829|gb|AED94212.1| condensin complex subunit 3
           [Arabidopsis thaliana]
          Length = 1051

 Score =  101 bits (252), Expect = 5e-20
 Identities = 47/79 (59%), Positives = 60/79 (75%)
 Frame = +3

Query: 6   DCDAFFEQFLRFLIXXXXXXXXXXXXXXCQIISEIIMRLPDDAEVSNELWDEVIDCIKVR 185
           DCD F E+FL+FL+              CQIISEII+RLPD+ EV++ELWD+VIDC+ +R
Sbjct: 110 DCDEFLEEFLKFLVAGSVAANRNARFRACQIISEIILRLPDEVEVADELWDDVIDCMMLR 169

Query: 186 VGDKVPLIRTFSVRALSRF 242
           V DKVP+IRTF+VR+LSRF
Sbjct: 170 VRDKVPVIRTFAVRSLSRF 188


Top