BLASTX nr result

ID: Atractylodes22_contig00056529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056529
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein A...    86   4e-15
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        82   6e-14
ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin...    81   1e-13
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...    80   2e-13

>ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 265

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
 Frame = +1

Query: 40  LKNIMRKFIWGGGDNIKGKAKVAWRGVCIPKMQGGLRVKPLRDWNIALISKHLWNVVAEK 219
           +  I+R + W G +  +G  KVAW  VC+P  +GGL ++    WNIA   K LW ++ + 
Sbjct: 109 VNKILRSYFWRGKEEGRGGDKVAWDEVCLPFDEGGLVIRDRSSWNIASTLKILWLLLVKS 168

Query: 220 ESLWVRWIHLYRLRG-CIWDVSKGYDPSWSSEENLRLGEEYRCHFVHEIGGGR 375
            SLWV W+  Y L+G  +W++  G   SW     LR  E    H   E+G G+
Sbjct: 169 GSLWVAWVEAYILKGRSLWEIDVGVGRSWCFRAILRKREILEAHVNIEVGNGK 221


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
 Frame = +1

Query: 37   RLKNIMRKFIWGGGDNIKGKAKVAWRGVCIPKMQGGLRVKPLRDWNIALISKHLWNVVAE 216
            R++++  +F+W G        KV+W  +C+PK +GGL ++ L +WN  L  + +W +   
Sbjct: 831  RIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVA 890

Query: 217  KESLWVRWIHLYRL-RGCIWDVSKGYDPSWSSEENLRLGEEYRCHFVHEIGGG 372
            K+SLW  W HL+ L RG  W V  G   SW+ +  L L        V ++G G
Sbjct: 891  KDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNG 943


>ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 1089

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = +1

Query: 37  RLKNIMRKFIWGGGDNIKGKAKVAWRGVCIPKMQGGLRVKPLRDWNIALISKHLWNVVAE 216
           R++ + R F+W G   +  K+ VAW  VC PK QGGL V   + WN A + K LWN+  +
Sbjct: 117 RIEAVCRSFLWTGKSCVTKKSPVAWNKVCAPKNQGGLNVINFQSWNKACLIKLLWNLYKK 176

Query: 217 KESLWVRWIHLYRLRG 264
           ++SLW++W+H Y  RG
Sbjct: 177 EDSLWIQWVHTYYTRG 192


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
 Frame = +1

Query: 40  LKNIMRKFIWGGGDNIKGKAKVAWRGVCIPKMQGGLRVKPLRDWNIALISKHLWNVVAEK 219
           ++ IM+ F+W G D     AKVAW  VC+PK +GGL +K +++WN   + KH+WN+  + 
Sbjct: 126 VEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDS 185

Query: 220 E-SLWVRWIHLYRLRG-CIWDVSKGYDPSWSSEENLRL 327
           + S+W  WI    LRG   W +    + SW+  + L+L
Sbjct: 186 DGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKL 223


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Cucumis sativus]
          Length = 647

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
 Frame = +1

Query: 49  IMRKFIWGGGDNIKGKAKVAWRGVCIPKMQGGLRVKPLRDWNIALISKHLWNVVAEKESL 228
           I+R ++W G +  +G AKVAW  VC+P  +GGL +     WN A   K LW ++ +  SL
Sbjct: 294 ILRSYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAICDGSSWNKASTLKILWLLLVKSGSL 353

Query: 229 WVRWIHLYRLRG-CIWDVSKGYDPSWSSEENLRLGEEYRCHFVHEIGGGR 375
           WV W+  Y L+G  +W++  G   SW     LR  +  + H   ++G  R
Sbjct: 354 WVAWVEAYILKGRSLWEIDAGAGRSWCFRAILRKRDILKAHVEMKLGNVR 403


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