BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056495
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620577.1| RING finger family protein [Medicago truncat...    83   3e-14
ref|XP_002514252.1| RING-H2 finger protein ATL4J precursor, puta...    79   5e-13
gb|AAU84668.1| At4g28890 [Arabidopsis thaliana] gi|55167896|gb|A...    76   3e-12
ref|NP_194618.3| E3 ubiquitin-protein ligase ATL42 [Arabidopsis ...    76   3e-12
ref|XP_002867435.1| ring-H2 finger protein ATL4J precursor [Arab...    72   4e-11

>ref|XP_003620577.1| RING finger family protein [Medicago truncatula]
           gi|355495592|gb|AES76795.1| RING finger family protein
           [Medicago truncatula]
          Length = 362

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 50/118 (42%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
 Frame = +2

Query: 47  DEDQEILHKFNHRITVRGDHEPMILKNRWSNVSSSDLLFLKSEMITCMSSNRFDHHPSPE 226
           D + +  HK NH+IT+      ++ K+RWSNVSSSDL+FL SEMI   SSNRF++     
Sbjct: 242 DSNNKAYHKHNHKITI----SDVVFKHRWSNVSSSDLMFLNSEMINASSSNRFNN----- 292

Query: 227 IEVKAME-TGDRRSVSEITVHPRFXXXXXXXXXXXXXXXWLPIARKTVQRFARKESRT 397
           +E K  +  G++RSVSEIT   RF               W PIAR+T + F  +E R+
Sbjct: 293 MESKFQDYDGEKRSVSEITGVSRF-KDFDMKKRERRRKLWFPIARRTAEWFVNREKRS 349


>ref|XP_002514252.1| RING-H2 finger protein ATL4J precursor, putative [Ricinus communis]
           gi|223546708|gb|EEF48206.1| RING-H2 finger protein ATL4J
           precursor, putative [Ricinus communis]
          Length = 267

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 64/193 (33%), Positives = 80/193 (41%), Gaps = 68/193 (35%)
 Frame = +2

Query: 47  DEDQEILHKFNHRITVRGDHEPMILKNRWSNVSSSDLLFLKSEMITCMSSNRFDHHPS-- 220
           D++Q +LHKFNH+I +      ++LKNRWSNVSSSDL+FL +EM+  MSSNRF    S  
Sbjct: 75  DDEQRVLHKFNHKIII----SDVVLKNRWSNVSSSDLMFLNAEMLQDMSSNRFSSSDSNN 130

Query: 221 ---------------PEIEVKAM------------------------------------- 244
                           E+E K +                                     
Sbjct: 131 EQFISTENEQMVKIKEEMEKKRLFESKFSTISNCDSPTPFPGNPSTSSDSNRISGHNTSS 190

Query: 245 --ETGDRRSVSEITVHPRF------------XXXXXXXXXXXXXXXWLPIARKTVQRFAR 382
             ++GDRRSVSEIT   RF                           WLPIAR+TVQ FA 
Sbjct: 191 IIDSGDRRSVSEITGLSRFRNVSIKKTIRESFSGENNREEDRVRRQWLPIARRTVQWFAN 250

Query: 383 KESRTGPTGQQLQ 421
           +E     T QQ Q
Sbjct: 251 REK----TSQQTQ 259


>gb|AAU84668.1| At4g28890 [Arabidopsis thaliana] gi|55167896|gb|AAV43780.1|
           At4g28890 [Arabidopsis thaliana]
          Length = 386

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 65/191 (34%), Positives = 81/191 (42%), Gaps = 62/191 (32%)
 Frame = +2

Query: 11  NIEKWMTMDTELDEDQE-ILHKFNHRITVRGDHEPMILKNRWSNVSSSDLLFLKSEMITC 187
           N EK +  +   D+D++ ++HKFNHRI V      ++ KNRWSNVSSSDL+FL SEM+  
Sbjct: 189 NKEKTLLDEHVNDKDEKKLMHKFNHRIVV----SDVVFKNRWSNVSSSDLMFLNSEMVNS 244

Query: 188 MSSNRF---DH-------------HPSPEIEVKAM--------------ETGD------- 256
           +SS RF   DH                 E+E K M              E GD       
Sbjct: 245 ISSERFSSLDHVKRGDEEDQIGILRIKEEMEAKRMLENKLTSMTTMFSSENGDSGSKSRS 304

Query: 257 ------RRSVSEITVHPRF------------------XXXXXXXXXXXXXXXWLPIARKT 364
                 RRSVS+IT  PR                                  WLPIARKT
Sbjct: 305 VMIEPGRRSVSDITAVPRLSISIHGDCSGSAAETASALQNGGNETEERRRRLWLPIARKT 364

Query: 365 VQRFARKESRT 397
            Q FA +E R+
Sbjct: 365 AQWFANREKRS 375


>ref|NP_194618.3| E3 ubiquitin-protein ligase ATL42 [Arabidopsis thaliana]
           gi|68565150|sp|Q5XF85.2|ATL42_ARATH RecName: Full=E3
           ubiquitin-protein ligase ATL42; AltName: Full=RING-H2
           finger protein ATL42; Flags: Precursor
           gi|4972078|emb|CAB43903.1| putative protein [Arabidopsis
           thaliana] gi|7269744|emb|CAB81477.1| putative protein
           [Arabidopsis thaliana] gi|66865954|gb|AAY57611.1| RING
           finger family protein [Arabidopsis thaliana]
           gi|332660159|gb|AEE85559.1| E3 ubiquitin-protein ligase
           ATL42 [Arabidopsis thaliana]
          Length = 432

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 65/191 (34%), Positives = 81/191 (42%), Gaps = 62/191 (32%)
 Frame = +2

Query: 11  NIEKWMTMDTELDEDQE-ILHKFNHRITVRGDHEPMILKNRWSNVSSSDLLFLKSEMITC 187
           N EK +  +   D+D++ ++HKFNHRI V      ++ KNRWSNVSSSDL+FL SEM+  
Sbjct: 235 NKEKTLLDEHVNDKDEKKLMHKFNHRIVV----SDVVFKNRWSNVSSSDLMFLNSEMVNS 290

Query: 188 MSSNRF---DH-------------HPSPEIEVKAM--------------ETGD------- 256
           +SS RF   DH                 E+E K M              E GD       
Sbjct: 291 ISSERFSSLDHVKRGDEEDQIGILRIKEEMEAKRMLENKLTSMTTMFSSENGDSGSKSRS 350

Query: 257 ------RRSVSEITVHPRF------------------XXXXXXXXXXXXXXXWLPIARKT 364
                 RRSVS+IT  PR                                  WLPIARKT
Sbjct: 351 VMIEPGRRSVSDITAVPRLSISIHGDCSGSAAETASALQNGGNETEERRRRLWLPIARKT 410

Query: 365 VQRFARKESRT 397
            Q FA +E R+
Sbjct: 411 AQWFANREKRS 421


>ref|XP_002867435.1| ring-H2 finger protein ATL4J precursor [Arabidopsis lyrata subsp.
           lyrata] gi|297313271|gb|EFH43694.1| ring-H2 finger
           protein ATL4J precursor [Arabidopsis lyrata subsp.
           lyrata]
          Length = 435

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 59/176 (33%), Positives = 73/176 (41%), Gaps = 61/176 (34%)
 Frame = +2

Query: 50  EDQEILHKFNHRITVRGDHEPMILKNRWSNVSSSDLLFLKSEMITCMSSNRF-------- 205
           ++++++HKFNHRI V      ++ KNRWSNVSSSDL+FL SEM+  +SS RF        
Sbjct: 252 DEKKLMHKFNHRIVV----SDVVFKNRWSNVSSSDLMFLNSEMVNSISSERFLSIDRAKR 307

Query: 206 -DHHP-------SPEIEVKAM--------------ETGD-------------RRSVSEIT 280
            D            E+E K M              E GD             RRSVS+IT
Sbjct: 308 GDEEDQIGILRIKEEMEAKRMLENKLTSMKTMFSPENGDSGSKSRSVMIEPGRRSVSDIT 367

Query: 281 VHPRF------------------XXXXXXXXXXXXXXXWLPIARKTVQRFARKESR 394
             PR                                  WLPIARKT Q FA +E R
Sbjct: 368 AVPRLSISVHRDCSGSAAGTASALQNGGNETEERRRRLWLPIARKTAQWFANREKR 423