BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056460
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX95226.1| retrotransposon protein, putative, unclassified [...    82   5e-14
gb|ABA91843.2| retrotransposon protein, putative, unclassified [...    82   5e-14
gb|ABF98227.1| retrotransposon protein, putative, unclassified [...    81   1e-13
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]      81   1e-13
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    79   4e-13

>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1513

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/84 (48%), Positives = 49/84 (58%)
 Frame = -1

Query: 270  GPFPILASVGDVAYKLQLPESAKIHLVFHVSLLKKAVRENTVESALPPGLEADSATSPQP 91
            GPF +L  +G VAYKLQLPE A IH VFHVS LKK + +  V  +  P +  D     QP
Sbjct: 1406 GPFKVLEKIGQVAYKLQLPEDASIHPVFHVSQLKKHLGQRAVPMSNLPSMGPDGQIKTQP 1465

Query: 90   AKCLATREITKNGEKVPQWLIQWQ 19
               L  R I +NG  V QWLI W+
Sbjct: 1466 VAVLQRRMIPRNGVAVTQWLILWE 1489


>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1411

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/84 (48%), Positives = 49/84 (58%)
 Frame = -1

Query: 270  GPFPILASVGDVAYKLQLPESAKIHLVFHVSLLKKAVRENTVESALPPGLEADSATSPQP 91
            GPF +L  +G VAYKLQLPE A IH VFHVS LKK + +  V  +  P +  D     QP
Sbjct: 1304 GPFKVLEKIGQVAYKLQLPEDASIHPVFHVSQLKKHLGQRAVPMSNLPSMGPDGQIKTQP 1363

Query: 90   AKCLATREITKNGEKVPQWLIQWQ 19
               L  R I +NG  V QWLI W+
Sbjct: 1364 VAVLQRRMIPRNGVAVTQWLILWE 1387


>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1160

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/90 (46%), Positives = 51/90 (56%)
 Frame = -1

Query: 270  GPFPILASVGDVAYKLQLPESAKIHLVFHVSLLKKAVRENTVESALPPGLEADSATSPQP 91
            GPF +L  +G VAYKLQLPE A IH VFHVS LKK V    +     P + AD     +P
Sbjct: 1053 GPFRVLEKIGKVAYKLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKTEP 1112

Query: 90   AKCLATREITKNGEKVPQWLIQWQQGTVDE 1
               LA R I +  E V QWLI W+  T ++
Sbjct: 1113 LAVLARRVIPRQNEPVVQWLIHWENLTPED 1142


>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1246

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/90 (46%), Positives = 51/90 (56%)
 Frame = -1

Query: 270  GPFPILASVGDVAYKLQLPESAKIHLVFHVSLLKKAVRENTVESALPPGLEADSATSPQP 91
            GPF +L  +G VAYKLQLPE A IH VFHVS LKK V    +     P + AD     +P
Sbjct: 1139 GPFRVLEKIGKVAYKLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKTEP 1198

Query: 90   AKCLATREITKNGEKVPQWLIQWQQGTVDE 1
               LA R I +  E V QWLI W+  T ++
Sbjct: 1199 LAVLARRVIPRQNEPVVQWLIHWENLTPED 1228


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/89 (48%), Positives = 53/89 (59%)
 Frame = -1

Query: 267  PFPILASVGDVAYKLQLPESAKIHLVFHVSLLKKAVRENTVESALPPGLEADSATSPQPA 88
            P+P+ A VG VAYKL+LPE +++H VFHVSLLKKAV     E  L P LE D     +P 
Sbjct: 1150 PYPVEARVGAVAYKLKLPEGSRVHSVFHVSLLKKAVGNYHEEENL-PDLEEDKGVVIEPE 1208

Query: 87   KCLATREITKNGEKVPQWLIQWQQGTVDE 1
              L  R I   GEK+ Q L+ W    V+E
Sbjct: 1209 TVLTRRTIQVQGEKIDQVLVHWMGQKVEE 1237