BLASTX nr result

ID: Atractylodes22_contig00056441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056441
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620577.1| RING finger family protein [Medicago truncat...   107   1e-21
ref|XP_002516536.1| ring finger protein, putative [Ricinus commu...   107   1e-21
emb|CBI28025.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   106   2e-21
ref|XP_003534218.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   105   4e-21

>ref|XP_003620577.1| RING finger family protein [Medicago truncatula]
           gi|355495592|gb|AES76795.1| RING finger family protein
           [Medicago truncatula]
          Length = 362

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/63 (79%), Positives = 54/63 (85%)
 Frame = -2

Query: 189 LGNLARTRARLSGIDKTIIESLPFFKFSMLKGCKNGLECSVCLSAFEDVEILRLLPKCKH 10
           L  L R+R+R SGIDKT IESLPFFKFS LKG K GLECS+CLS FED+EILRLLPKCKH
Sbjct: 81  LATLMRSRSRFSGIDKTAIESLPFFKFSSLKGSKQGLECSICLSKFEDIEILRLLPKCKH 140

Query: 9   AFH 1
           AFH
Sbjct: 141 AFH 143


>ref|XP_002516536.1| ring finger protein, putative [Ricinus communis]
           gi|223544356|gb|EEF45877.1| ring finger protein,
           putative [Ricinus communis]
          Length = 407

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/83 (63%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
 Frame = -2

Query: 243 AKCCRXXXXXVHRLHRENLGN--LARTRARLSGIDKTIIESLPFFKFSMLKGCKNGLECS 70
           AK CR      H  H  N     L R+R+RLSGID+ +I+SLPFF+FS LKG K GLEC+
Sbjct: 60  AKFCRRNLTDNHLSHDTNHQGFTLVRSRSRLSGIDREVIDSLPFFRFSSLKGSKEGLECA 119

Query: 69  VCLSAFEDVEILRLLPKCKHAFH 1
           VCLS FED+EILRLLPKCKHAFH
Sbjct: 120 VCLSRFEDIEILRLLPKCKHAFH 142


>emb|CBI28025.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/66 (74%), Positives = 55/66 (83%)
 Frame = -2

Query: 198 RENLGNLARTRARLSGIDKTIIESLPFFKFSMLKGCKNGLECSVCLSAFEDVEILRLLPK 19
           REN   L R+ +R SGIDKT+IESLPFF+F  LKG K GLEC+VCLS FED+EILRLLPK
Sbjct: 121 RENQQGLTRSESRFSGIDKTVIESLPFFRFCSLKGSKEGLECAVCLSKFEDIEILRLLPK 180

Query: 18  CKHAFH 1
           CKHAFH
Sbjct: 181 CKHAFH 186


>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
          Length = 423

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/66 (74%), Positives = 55/66 (83%)
 Frame = -2

Query: 198 RENLGNLARTRARLSGIDKTIIESLPFFKFSMLKGCKNGLECSVCLSAFEDVEILRLLPK 19
           REN   L R+ +R SGIDKT+IESLPFF+F  LKG K GLEC+VCLS FED+EILRLLPK
Sbjct: 75  RENQQGLTRSESRFSGIDKTVIESLPFFRFCSLKGSKEGLECAVCLSKFEDIEILRLLPK 134

Query: 18  CKHAFH 1
           CKHAFH
Sbjct: 135 CKHAFH 140


>ref|XP_003534218.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
          Length = 419

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/65 (75%), Positives = 55/65 (84%)
 Frame = -2

Query: 195 ENLGNLARTRARLSGIDKTIIESLPFFKFSMLKGCKNGLECSVCLSAFEDVEILRLLPKC 16
           EN     R+R+R SGIDKT+IESLPFF+FS LKG K GLEC+VCLS FEDVEILRL+PKC
Sbjct: 79  ENQLTFVRSRSRFSGIDKTVIESLPFFRFSALKGLKEGLECAVCLSKFEDVEILRLVPKC 138

Query: 15  KHAFH 1
           KHAFH
Sbjct: 139 KHAFH 143


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