BLASTX nr result

ID: Atractylodes22_contig00056433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056433
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310338.1| white-brown-complex ABC transporter family [...    86   4e-15
ref|XP_002527217.1| ATP-binding cassette transporter, putative [...    78   9e-13
ref|XP_003612949.1| ABC transporter G family member [Medicago tr...    71   8e-11
ref|XP_003566290.1| PREDICTED: ABC transporter G family member 6...    70   2e-10
dbj|BAK00469.1| predicted protein [Hordeum vulgare subsp. vulgare]     70   2e-10

>ref|XP_002310338.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222853241|gb|EEE90788.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 732

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 45/75 (60%), Positives = 50/75 (66%)
 Frame = +2

Query: 86  MSHNHKGTGPDMVIDIGKPVNFTGGLEFMDLTYTVMXXXXXXXXXXXXXXADLLNRITGY 265
           M+H + G   + VIDI KP++FTGGLEF  LTYTV                DLLNRITGY
Sbjct: 1   MAHKNIGNRQEAVIDIVKPISFTGGLEFSSLTYTVTKSQKLEGKWIKQK-VDLLNRITGY 59

Query: 266 APKGCITAVMGPSGA 310
           APKGCITAVMGPSGA
Sbjct: 60  APKGCITAVMGPSGA 74


>ref|XP_002527217.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223533393|gb|EEF35143.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 724

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/65 (63%), Positives = 45/65 (69%)
 Frame = +2

Query: 116 DMVIDIGKPVNFTGGLEFMDLTYTVMXXXXXXXXXXXXXXADLLNRITGYAPKGCITAVM 295
           + +IDIGKPV+FTGGLEF  LTYTV                DLL+ ITGYAPKGCITAVM
Sbjct: 10  ETLIDIGKPVSFTGGLEFCGLTYTVTKKKKIEGKWLSQD-VDLLHAITGYAPKGCITAVM 68

Query: 296 GPSGA 310
           GPSGA
Sbjct: 69  GPSGA 73


>ref|XP_003612949.1| ABC transporter G family member [Medicago truncatula]
           gi|163889368|gb|ABY48138.1| ABC transporter [Medicago
           truncatula] gi|258518205|gb|ACV73543.1| STR2 [Medicago
           truncatula] gi|258518207|gb|ACV73544.1| STR2 [Medicago
           truncatula] gi|355514284|gb|AES95907.1| ABC transporter
           G family member [Medicago truncatula]
          Length = 727

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/71 (59%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = +2

Query: 101 KGTGPDMVIDIG-KPVNFTGGLEFMDLTYTVMXXXXXXXXXXXXXXADLLNRITGYAPKG 277
           +G   + VIDI  KPV+FTGGLEF  LTYTV                DLL+ ITGYAPKG
Sbjct: 4   QGLELETVIDIKHKPVSFTGGLEFESLTYTVTKKKKVDGKWSNED-VDLLHDITGYAPKG 62

Query: 278 CITAVMGPSGA 310
           CITAVMGPSGA
Sbjct: 63  CITAVMGPSGA 73


>ref|XP_003566290.1| PREDICTED: ABC transporter G family member 6-like [Brachypodium
           distachyon]
          Length = 725

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/78 (47%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
 Frame = +2

Query: 95  NHKGTGPDMVIDIGKP------VNFTGGLEFMDLTYTVMXXXXXXXXXXXXXXADLLNRI 256
           NH+    +  ID+ +         FTGGLEF  LTYTV+               DLL+ I
Sbjct: 6   NHRHRDLEAAIDMAQQQQRPPAAGFTGGLEFTSLTYTVVKKQRGAGGEWEKKDVDLLHEI 65

Query: 257 TGYAPKGCITAVMGPSGA 310
           TGYAPKGC+TAVMGPSGA
Sbjct: 66  TGYAPKGCVTAVMGPSGA 83


>dbj|BAK00469.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 714

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/59 (57%), Positives = 38/59 (64%)
 Frame = +2

Query: 134 GKPVNFTGGLEFMDLTYTVMXXXXXXXXXXXXXXADLLNRITGYAPKGCITAVMGPSGA 310
           G   +FTGGLEF  LTYTV+               DLL+ ITGYAPKGC+TAVMGPSGA
Sbjct: 31  GSRFSFTGGLEFTSLTYTVVKKQRGVGGEWEKKDVDLLHEITGYAPKGCVTAVMGPSGA 89


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