BLASTX nr result

ID: Atractylodes22_contig00056426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056426
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]     154   7e-36
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]   153   2e-35
gb|ABC94893.1| polyprotein [Oryza australiensis]                      151   6e-35
gb|AAM14684.1|AC097446_13 Putative polyprotein [Oryza sativa Jap...   150   8e-35
gb|ABF97872.1| retrotransposon protein, putative, Ty3-gypsy subc...   150   8e-35

>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
          Length = 1771

 Score =  154 bits (389), Expect = 7e-36
 Identities = 67/105 (63%), Positives = 83/105 (79%)
 Frame = +2

Query: 2    RIWVRRVGGMREVLLHEAHRSRYSIHPGNTKMYLDLKSNYWWPGMKLDVADYVSKCVICS 181
            RI V RVG + +++L EAH SRYSIHPG  KMY DL+ +YWW GM+ D+AD+VS+C+ C 
Sbjct: 1334 RICVPRVGDLIQLILSEAHESRYSIHPGTAKMYRDLRQHYWWSGMRRDIADFVSRCLCCQ 1393

Query: 182  QVKAEHQKPYGELQQLEIPEWKWDKITMDFVTKLPRTPRGNDTIW 316
            QVKAEH +P GE Q+L IPEWKW++ITMDFV  LPRT RG D+IW
Sbjct: 1394 QVKAEHLRPGGEFQRLPIPEWKWERITMDFVVGLPRTSRGVDSIW 1438


>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
          Length = 1475

 Score =  153 bits (386), Expect = 2e-35
 Identities = 65/105 (61%), Positives = 83/105 (79%)
 Frame = +2

Query: 2    RIWVRRVGGMREVLLHEAHRSRYSIHPGNTKMYLDLKSNYWWPGMKLDVADYVSKCVICS 181
            RI V RVG + +++L E H SRYSIHPG TKMY DL+ +YWW GM+ D+AD+VS+C+ C 
Sbjct: 1178 RICVPRVGDLIQLILSEGHESRYSIHPGTTKMYRDLRQHYWWSGMRRDIADFVSRCLCCQ 1237

Query: 182  QVKAEHQKPYGELQQLEIPEWKWDKITMDFVTKLPRTPRGNDTIW 316
            QVKAEH +P G  ++L IPEWKW++ITMDF+  LPRTPRG D+IW
Sbjct: 1238 QVKAEHLRPGGVFKRLPIPEWKWERITMDFIVGLPRTPRGVDSIW 1282


>gb|ABC94893.1| polyprotein [Oryza australiensis]
          Length = 1469

 Score =  151 bits (381), Expect = 6e-35
 Identities = 66/105 (62%), Positives = 81/105 (77%)
 Frame = +2

Query: 2    RIWVRRVGGMREVLLHEAHRSRYSIHPGNTKMYLDLKSNYWWPGMKLDVADYVSKCVICS 181
            RI V   GG+RE++L EAH S YS+HPG+TKMY DLK  YWWP MK DVA+YV+ C +C 
Sbjct: 1035 RICVPERGGLRELILKEAHESAYSLHPGSTKMYQDLKGEYWWPNMKRDVAEYVAVCDVCQ 1094

Query: 182  QVKAEHQKPYGELQQLEIPEWKWDKITMDFVTKLPRTPRGNDTIW 316
            +VKAEHQ+P G LQ L+IPEWKWD+I MDF+  LP+T  G D+IW
Sbjct: 1095 RVKAEHQRPAGLLQPLKIPEWKWDEIGMDFIVGLPKTATGYDSIW 1139


>gb|AAM14684.1|AC097446_13 Putative polyprotein [Oryza sativa Japonica Group]
            gi|22725924|gb|AAN04934.1| Putative polyprotein [Oryza
            sativa Japonica Group] gi|31430228|gb|AAP52174.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1569

 Score =  150 bits (380), Expect = 8e-35
 Identities = 65/105 (61%), Positives = 81/105 (77%)
 Frame = +2

Query: 2    RIWVRRVGGMREVLLHEAHRSRYSIHPGNTKMYLDLKSNYWWPGMKLDVADYVSKCVICS 181
            RI+V   GG+R ++L EAH+S YS+HPG+TKMY DLK  YWWP MK DVA+YV+ C +C 
Sbjct: 1135 RIYVPEQGGLRGLILKEAHKSAYSLHPGSTKMYQDLKEGYWWPNMKRDVAEYVALCDVCQ 1194

Query: 182  QVKAEHQKPYGELQQLEIPEWKWDKITMDFVTKLPRTPRGNDTIW 316
            +VKAEHQ+P G LQ L IPEWKWD+I MDF+  LP+T  G D+IW
Sbjct: 1195 KVKAEHQRPAGLLQPLRIPEWKWDEIGMDFIVGLPKTATGYDSIW 1239


>gb|ABF97872.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1299

 Score =  150 bits (380), Expect = 8e-35
 Identities = 65/105 (61%), Positives = 81/105 (77%)
 Frame = +2

Query: 2    RIWVRRVGGMREVLLHEAHRSRYSIHPGNTKMYLDLKSNYWWPGMKLDVADYVSKCVICS 181
            RI+V   GG+R ++L EAH+S YS+HPG+TKMY DLK  YWWP MK DVA+YV+ C +C 
Sbjct: 906  RIYVPEQGGLRGLILKEAHKSAYSLHPGSTKMYQDLKEGYWWPNMKRDVAEYVALCDVCQ 965

Query: 182  QVKAEHQKPYGELQQLEIPEWKWDKITMDFVTKLPRTPRGNDTIW 316
            +VKAEHQ+P G LQ L IPEWKWD+I MDF+  LP+T  G D+IW
Sbjct: 966  KVKAEHQRPAGLLQPLRIPEWKWDEIGMDFIVGLPKTATGYDSIW 1010


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