BLASTX nr result

ID: Atractylodes22_contig00056425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056425
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcript...    57   2e-06
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]            57   2e-06
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    56   4e-06
emb|CAB72467.1| putative protein [Arabidopsis thaliana]                55   6e-06
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...    55   8e-06

>ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcriptase)-related protein
           [Arabidopsis thaliana] gi|332643359|gb|AEE76880.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related protein [Arabidopsis thaliana]
          Length = 746

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
 Frame = +2

Query: 74  KDKMRWKN------------KVWKDVKQERLMVAWARLVWFHHNVHKHAFILWLAIKGRL 217
           +D +RWK             + W   ++ +L V W + VWF H   K++ + W+AIK RL
Sbjct: 250 EDTVRWKGNGDIFKPCFNTKETWAATREPKLKVNWYKGVWFSHATPKYSVLAWIAIKNRL 309

Query: 218 KPQDRCLEWNKEKDGVYVFC 277
              DR L WN   D   V C
Sbjct: 310 TTGDRMLSWNAGADSSCVLC 329


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
 Frame = +2

Query: 74  KDKMRWKN------------KVWKDVKQERLMVAWARLVWFHHNVHKHAFILWLAIKGRL 217
           +D +RWK             + W   ++ +L V W + VWF H   K++ + W+AIK RL
Sbjct: 278 EDTVRWKGNGDIFKPCFNTKETWAATREPKLKVNWYKGVWFSHATPKYSVLAWIAIKNRL 337

Query: 218 KPQDRCLEWNKEKDGVYVFC 277
              DR L WN   D   V C
Sbjct: 338 TTGDRMLSWNAGADSSCVLC 357


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
 Frame = +2

Query: 74  KDKMRWKNK------------VWKDVKQERLMVAWARLVWFHHNVHKHAFILWLAIKGRL 217
           +D+  WK K             W  ++     VAW + VWF   + KHAF +WLA+  RL
Sbjct: 271 EDRALWKGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRL 330

Query: 218 KPQDRCLEWNKEKDGVYVFCKSA 286
              DR   WN   D   + C  A
Sbjct: 331 STGDRMTLWNMGVDATCILCNKA 353


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/69 (39%), Positives = 37/69 (53%)
 Frame = +2

Query: 74  KDKMRWKNKVWKDVKQERLMVAWARLVWFHHNVHKHAFILWLAIKGRLKPQDRCLEWNKE 253
           KDK   KN  W  ++     VAW + VWF H   K++F LWLA   RL    R ++WN+ 
Sbjct: 590 KDKFSTKN-TWNYLRTTSNEVAWHKGVWFPHATPKYSFCLWLAAHDRLATGARMIKWNRG 648

Query: 254 KDGVYVFCK 280
           + G   FC+
Sbjct: 649 ETGDCTFCR 657


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/61 (37%), Positives = 31/61 (50%)
 Frame = +2

Query: 104 WKDVKQERLMVAWARLVWFHHNVHKHAFILWLAIKGRLKPQDRCLEWNKEKDGVYVFCKS 283
           W  ++     VAW + VWF   + KHAF +WLA+  RL   DR   WN   D   + C +
Sbjct: 374 WNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWNMGVDATCILCNN 433

Query: 284 A 286
           A
Sbjct: 434 A 434


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