BLASTX nr result

ID: Atractylodes22_contig00056394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056394
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc...   239   2e-61
gb|ACA61613.1| hypothetical protein AP2_E11.1 [Arabidopsis lyrat...   238   3e-61
gb|ABA94365.1| retrotransposon protein, putative, unclassified [...   238   4e-61
gb|ABB47203.2| retrotransposon protein, putative, unclassified [...   236   1e-60
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...   236   1e-60

>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 978

 Score =  239 bits (609), Expect = 2e-61
 Identities = 119/166 (71%), Positives = 133/166 (80%)
 Frame = +3

Query: 3    RYKARLVANGSSQQLGIDCDETFSPVVKPATIRTVLSLAVSRKWPIHQLDVKNAFLNGDL 182
            R+KAR V  G SQQ GID DE FSPVVKPATIR VLS+A SR WPIHQLDVKNAFL+G+L
Sbjct: 569  RHKARWVVRGYSQQHGIDYDEIFSPVVKPATIRVVLSIAASRSWPIHQLDVKNAFLHGNL 628

Query: 183  SETVYMHQPPGFVDPRYPHHVCLLQKSLYGLKQAPRAWFQRFASYATRVGFYHSRCDSSL 362
             ETVY  QP GFVDP  P+ VCLLQKSLYGLKQAPRAW+QRFA+Y  ++GF  S  D+SL
Sbjct: 629  EETVYCQQPSGFVDPSAPNAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSSASDTSL 688

Query: 363  FILRQGSQVAYLLIYVDDIILTASSTVLLQQIIASLHSEFDMTDLG 500
            F+ + G  +AYLL+YVDDIILTASS  LLQ I A LHSEF MTDLG
Sbjct: 689  FVYKDGDNIAYLLLYVDDIILTASSATLLQHITARLHSEFAMTDLG 734


>gb|ACA61613.1| hypothetical protein AP2_E11.1 [Arabidopsis lyrata subsp. petraea]
          Length = 471

 Score =  238 bits (608), Expect = 3e-61
 Identities = 114/166 (68%), Positives = 138/166 (83%)
 Frame = +3

Query: 3   RYKARLVANGSSQQLGIDCDETFSPVVKPATIRTVLSLAVSRKWPIHQLDVKNAFLNGDL 182
           R+KARLVANG SQ+ GID +ETFSPVVKP TIRTVL++ V+ +WPIHQLDVKNAFL GDL
Sbjct: 16  RHKARLVANGKSQEEGIDYNETFSPVVKPTTIRTVLNVGVALEWPIHQLDVKNAFLQGDL 75

Query: 183 SETVYMHQPPGFVDPRYPHHVCLLQKSLYGLKQAPRAWFQRFASYATRVGFYHSRCDSSL 362
            ETVYMHQPPGF D   P +VC L K++YGLKQAPRAW  RF++Y  R+GF  S+ DSSL
Sbjct: 76  EETVYMHQPPGFTDKNNPSYVCKLNKAIYGLKQAPRAWNSRFSTYIKRMGFVQSKADSSL 135

Query: 363 FILRQGSQVAYLLIYVDDIILTASSTVLLQQIIASLHSEFDMTDLG 500
           FI ++G + AYLL+YVDDI+LTASST+LLQ+II+ L +EF MTD+G
Sbjct: 136 FIFKRGCECAYLLLYVDDILLTASSTLLLQKIISKLKTEFPMTDMG 181


>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1064

 Score =  238 bits (607), Expect = 4e-61
 Identities = 120/166 (72%), Positives = 133/166 (80%)
 Frame = +3

Query: 3    RYKARLVANGSSQQLGIDCDETFSPVVKPATIRTVLSLAVSRKWPIHQLDVKNAFLNGDL 182
            R+KAR V    SQQ GID DETFSPVVKPATIR VLS+A SR WPIHQLDVKNAFL+G+L
Sbjct: 657  RHKARWVVRDYSQQHGIDYDETFSPVVKPATIRVVLSIAASRSWPIHQLDVKNAFLHGNL 716

Query: 183  SETVYMHQPPGFVDPRYPHHVCLLQKSLYGLKQAPRAWFQRFASYATRVGFYHSRCDSSL 362
             ETVY  QP GFVDP  P  VCLLQKSLYGLKQAPRAW+QRFA+Y  ++GF  S  D+SL
Sbjct: 717  EETVYCQQPSGFVDPSAPTAVCLLQKSLYGLKQAPRAWYQRFATYICQLGFTSSASDTSL 776

Query: 363  FILRQGSQVAYLLIYVDDIILTASSTVLLQQIIASLHSEFDMTDLG 500
            FI + G  +AYLL+YVDDI+LTASST LLQ I A LHSEF MTDLG
Sbjct: 777  FIYKDGDNIAYLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLG 822


>gb|ABB47203.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  236 bits (603), Expect = 1e-60
 Identities = 120/166 (72%), Positives = 133/166 (80%)
 Frame = +3

Query: 3    RYKARLVANGSSQQLGIDCDETFSPVVKPATIRTVLSLAVSRKWPIHQLDVKNAFLNGDL 182
            R+KAR V  G SQQ GID +ETFSPVVKPATI  VLS+A SR WPIHQLDVKNAFL+G+L
Sbjct: 695  RHKARCVVRGYSQQHGIDYNETFSPVVKPATIHVVLSIAASRSWPIHQLDVKNAFLHGNL 754

Query: 183  SETVYMHQPPGFVDPRYPHHVCLLQKSLYGLKQAPRAWFQRFASYATRVGFYHSRCDSSL 362
             ETVY  QP GFVDP  P  VCLLQKSLYGLKQAPRAW+QRFA+Y  ++GF  S  D+SL
Sbjct: 755  EETVYCQQPFGFVDPSEPTAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSSASDTSL 814

Query: 363  FILRQGSQVAYLLIYVDDIILTASSTVLLQQIIASLHSEFDMTDLG 500
            FI + G  VAYLL+YVDDI+LTASST LLQ I A LHSEF MTDLG
Sbjct: 815  FIYKDGDNVAYLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLG 860


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score =  236 bits (603), Expect = 1e-60
 Identities = 120/166 (72%), Positives = 133/166 (80%)
 Frame = +3

Query: 3    RYKARLVANGSSQQLGIDCDETFSPVVKPATIRTVLSLAVSRKWPIHQLDVKNAFLNGDL 182
            R+KAR V  G SQQ GID +ETFSPVVKPATI  VLS+A SR WPIHQLDVKNAFL+G+L
Sbjct: 895  RHKARCVVRGYSQQHGIDYNETFSPVVKPATIHVVLSIAASRSWPIHQLDVKNAFLHGNL 954

Query: 183  SETVYMHQPPGFVDPRYPHHVCLLQKSLYGLKQAPRAWFQRFASYATRVGFYHSRCDSSL 362
             ETVY  QP GFVDP  P  VCLLQKSLYGLKQAPRAW+QRFA+Y  ++GF  S  D+SL
Sbjct: 955  EETVYCQQPFGFVDPSEPTAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSSASDTSL 1014

Query: 363  FILRQGSQVAYLLIYVDDIILTASSTVLLQQIIASLHSEFDMTDLG 500
            FI + G  VAYLL+YVDDI+LTASST LLQ I A LHSEF MTDLG
Sbjct: 1015 FIYKDGDNVAYLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLG 1060


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