BLASTX nr result

ID: Atractylodes22_contig00056393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056393
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        61   1e-07
dbj|BAD66709.1| orf177 [Beta vulgaris subsp. vulgaris]                 59   3e-07
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            58   9e-07
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    58   9e-07
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...    57   1e-06

>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 45/111 (40%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
 Frame = -3

Query: 321 FLECVKDIW-KVNVEGYAMFRVSAKLKMLKKPIRQL-RSKKGGLACRVNKCRLELHECQE 148
           FL  V+D W  +NV G +MFRVS KLK LKKPI+   R     L  R  +    L  CQ+
Sbjct: 261 FLNLVRDNWFTLNVVGSSMFRVSKKLKALKKPIKDFSRLNYSELEKRTKEAHDFLIGCQD 320

Query: 147 R--VDMNPEDEDGRLKQSRALLGLREALADEEAHYKQKSKIHWLKLGDANT 1
           R   D  P +    L+  R    L  A   EE+ ++QKS+I W   GD NT
Sbjct: 321 RTLADPTPINASFELEAERKWHILTAA---EESFFRQKSRISWFAEGDGNT 368


>dbj|BAD66709.1| orf177 [Beta vulgaris subsp. vulgaris]
          Length = 177

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
 Frame = -3

Query: 321 FLECVKDIWKVNVEGYAMFRVSAKLKMLKKPIRQLRSKK-GGLACRVNKCRLELHECQER 145
           F + V+D W   V G +M+RV  KL +LK  ++QL S +  G+  R+ K R +L   Q  
Sbjct: 7   FEDVVRDSWGAVVHGTSMYRVWRKLSLLKVGLKQLHSSQFAGITSRIEKAREDLEVVQSS 66

Query: 144 VDMNPEDEDGRLKQSRALLGLREALADEEAHYKQKSKIHWLKLGDAN 4
           +   P +    L        LR+  + EE+  +Q+S++ WL LGD+N
Sbjct: 67  LQAAPLNPS--LHSQEKTEQLRKWNSIEESALRQQSRVQWLTLGDSN 111


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
 Frame = -3

Query: 321 FLECVKDIW-KVNVEGYAMFRVSAKLKMLKKPIRQL-RSKKGGLACRVNKCRLELHECQE 148
           FL  V D W   NV G +M+RVS KLK +KKPI+   R    G+  R  +    L  CQ 
Sbjct: 121 FLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLITCQN 180

Query: 147 RVDMNPEDEDGRLKQSRALLGLREALADEEAHYKQKSKIHWLKLGDANT 1
               NP   +  L+       +  + A EE+ + Q+S++ W   GD+NT
Sbjct: 181 LTLANPSVSNAALELEAQRKWVLLSCA-EESFFHQRSRVSWFAEGDSNT 228


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
 Frame = -3

Query: 321 FLECVKDIW-KVNVEGYAMFRVSAKLKMLKKPIRQL-RSKKGGLACRVNKCRLELHECQE 148
           FL  V D W   NV G +M+RVS KLK +KKPI+   R    G+  R  +    L  CQ 
Sbjct: 121 FLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLITCQN 180

Query: 147 RVDMNPEDEDGRLKQSRALLGLREALADEEAHYKQKSKIHWLKLGDANT 1
               NP   +  L+       +  + A EE+ + Q+S++ W   GD+NT
Sbjct: 181 LTLANPSVSNAALELEAQRKWVLLSCA-EESFFHQRSRVSWFAEGDSNT 228


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
 Frame = -3

Query: 321  FLECVKDIWK----VNVEGYAMFRVSAKLKMLKKPIRQL-RSKKGGLACRVNKCRLELHE 157
            F   V++ W+    +++   ++FR + KLK LK  +R L + K G L  R  +  L L +
Sbjct: 678  FKPLVENFWRETEPIHMSTSSLFRFTKKLKALKPKLRGLAKEKMGNLVKRTREAYLSLCQ 737

Query: 156  CQERVDMNPEDEDGRLKQSRALLGLREALADEEAHYKQKSKIHWLKLGDAN 4
             Q+    NP      + +S A +      + EE + KQ SK+HWLK+GD N
Sbjct: 738  AQQSNSQNPSQRAMEI-ESEAYVRWDRIASIEEKYLKQVSKLHWLKVGDKN 787


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