BLASTX nr result

ID: Atractylodes22_contig00056384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056384
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containi...   104   8e-21
ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17
ref|XP_002529725.1| pentatricopeptide repeat-containing protein,...    90   2e-16
ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15

>ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  104 bits (259), Expect = 8e-21
 Identities = 50/80 (62%), Positives = 60/80 (75%)
 Frame = -3

Query: 245 GEQCHGYVLKSGLVFHQYVKNALVRLYSMSSDVVGAMEVLVSVPGSDTCTYNLILNGLVE 66
           G QCHGY LKSGLVFHQYVKNAL+ +YS  SDV GAM V   VPG D  +YN+I+NGL+E
Sbjct: 148 GWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLE 207

Query: 65  NGYLDEASNILRRMLAEHVM 6
           NGY  EA  +L RM+ E ++
Sbjct: 208 NGYPSEALEVLDRMVDECIV 227


>ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 42/79 (53%), Positives = 64/79 (81%)
 Frame = -3

Query: 245 GEQCHGYVLKSGLVFHQYVKNALVRLYSMSSDVVGAMEVLVSVPGSDTCTYNLILNGLVE 66
           G+QCHGY LKSGL FHQYVKNAL++LYS  SDV  A+++L +VPG+D   YNL++NGL++
Sbjct: 142 GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQ 201

Query: 65  NGYLDEASNILRRMLAEHV 9
           + ++ EA ++L+ +++E +
Sbjct: 202 HTHMAEAVDVLKLIISEGI 220


>ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/80 (55%), Positives = 60/80 (75%)
 Frame = -3

Query: 245 GEQCHGYVLKSGLVFHQYVKNALVRLYSMSSDVVGAMEVLVSVPGSDTCTYNLILNGLVE 66
           G+QCHGY+LKSGL+ HQYVKNAL+ +YS    V  AM++L +VPG D  +YN IL+ LVE
Sbjct: 147 GKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVE 206

Query: 65  NGYLDEASNILRRMLAEHVM 6
           +G   EA+ +L+RM+ E V+
Sbjct: 207 SGCRGEAAQVLKRMVDECVI 226


>ref|XP_002529725.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530789|gb|EEF32654.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 347

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/80 (53%), Positives = 56/80 (70%)
 Frame = -3

Query: 248 LGEQCHGYVLKSGLVFHQYVKNALVRLYSMSSDVVGAMEVLVSVPGSDTCTYNLILNGLV 69
           +G QCHG+  KSGLVFHQYV+NAL+ +YS    +  AM +  SVP +D   YN +L GL+
Sbjct: 58  VGIQCHGFAFKSGLVFHQYVRNALIHMYSKCLTIQEAMRISDSVPRNDIFAYNSVLIGLM 117

Query: 68  ENGYLDEASNILRRMLAEHV 9
           ENGYL E   ILR+M+ E+V
Sbjct: 118 ENGYLMEGLEILRKMVIENV 137


>ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|222867067|gb|EEF04198.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/79 (54%), Positives = 52/79 (65%)
 Frame = -3

Query: 245 GEQCHGYVLKSGLVFHQYVKNALVRLYSMSSDVVGAMEVLVSVPGSDTCTYNLILNGLVE 66
           G QCHG +LK+G  FH YV+NALV +YS  S V  AM V   VP +D   YN IL+ LVE
Sbjct: 152 GRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVE 211

Query: 65  NGYLDEASNILRRMLAEHV 9
           NGYL E   +LR M++E V
Sbjct: 212 NGYLREGLEVLRSMVSESV 230


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