BLASTX nr result

ID: Atractylodes22_contig00056369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056369
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196398.2| SNF2 and helicase domain-containing protein [Ar...   112   2e-43
dbj|BAB09945.1| unnamed protein product [Arabidopsis thaliana]        112   2e-43
emb|CAB62593.1| putative protein (fragment) [Arabidopsis thaliana]    112   2e-43
ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis ...   111   3e-43
ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealin...   103   5e-42

>ref|NP_196398.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
           gi|332003824|gb|AED91207.1| SNF2 and helicase
           domain-containing protein [Arabidopsis thaliana]
          Length = 1190

 Score =  112 bits (279), Expect(2) = 2e-43
 Identities = 56/85 (65%), Positives = 67/85 (78%)
 Frame = -2

Query: 432 QSSHKMIIFAHHHKVTDRVQEFLCEKEIKFVRIDARDTSARDRQQAIHSFQHSKEVKIAL 253
           +SS KM++FAHHHKV D +QEF+C+K I FVRID   T  RDRQ A+ SFQ S EVKIA+
Sbjct: 552 RSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGT-TLPRDRQLAVQSFQFSSEVKIAI 610

Query: 252 VGILAGSSGLDLSAAQNVVFLELPE 178
           +G+ AG  GLD SAAQNVVFLELP+
Sbjct: 611 IGVEAGGVGLDFSAAQNVVFLELPK 635



 Score = 89.0 bits (219), Expect(2) = 2e-43
 Identities = 40/50 (80%), Positives = 43/50 (86%)
 Frame = -1

Query: 160 QAESRAHRRGQTKAVNVYIFCAKDTSDESHWKRLNRSLHRTSSTVDGKYD 11
           QAE RAHRRGQT AVNVYIFCAKDT DES+W+ LN+ LHR SST DGKYD
Sbjct: 642 QAEDRAHRRGQTSAVNVYIFCAKDTMDESNWQNLNKKLHRISSTTDGKYD 691


>dbj|BAB09945.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1178

 Score =  112 bits (279), Expect(2) = 2e-43
 Identities = 56/85 (65%), Positives = 67/85 (78%)
 Frame = -2

Query: 432 QSSHKMIIFAHHHKVTDRVQEFLCEKEIKFVRIDARDTSARDRQQAIHSFQHSKEVKIAL 253
           +SS KM++FAHHHKV D +QEF+C+K I FVRID   T  RDRQ A+ SFQ S EVKIA+
Sbjct: 540 RSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGT-TLPRDRQLAVQSFQFSSEVKIAI 598

Query: 252 VGILAGSSGLDLSAAQNVVFLELPE 178
           +G+ AG  GLD SAAQNVVFLELP+
Sbjct: 599 IGVEAGGVGLDFSAAQNVVFLELPK 623



 Score = 89.0 bits (219), Expect(2) = 2e-43
 Identities = 40/50 (80%), Positives = 43/50 (86%)
 Frame = -1

Query: 160 QAESRAHRRGQTKAVNVYIFCAKDTSDESHWKRLNRSLHRTSSTVDGKYD 11
           QAE RAHRRGQT AVNVYIFCAKDT DES+W+ LN+ LHR SST DGKYD
Sbjct: 630 QAEDRAHRRGQTSAVNVYIFCAKDTMDESNWQNLNKKLHRISSTTDGKYD 679


>emb|CAB62593.1| putative protein (fragment) [Arabidopsis thaliana]
          Length = 786

 Score =  112 bits (279), Expect(2) = 2e-43
 Identities = 56/85 (65%), Positives = 67/85 (78%)
 Frame = -2

Query: 432 QSSHKMIIFAHHHKVTDRVQEFLCEKEIKFVRIDARDTSARDRQQAIHSFQHSKEVKIAL 253
           +SS KM++FAHHHKV D +QEF+C+K I FVRID   T  RDRQ A+ SFQ S EVKIA+
Sbjct: 540 RSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGT-TLPRDRQLAVQSFQFSSEVKIAI 598

Query: 252 VGILAGSSGLDLSAAQNVVFLELPE 178
           +G+ AG  GLD SAAQNVVFLELP+
Sbjct: 599 IGVEAGGVGLDFSAAQNVVFLELPK 623



 Score = 89.0 bits (219), Expect(2) = 2e-43
 Identities = 40/50 (80%), Positives = 43/50 (86%)
 Frame = -1

Query: 160 QAESRAHRRGQTKAVNVYIFCAKDTSDESHWKRLNRSLHRTSSTVDGKYD 11
           QAE RAHRRGQT AVNVYIFCAKDT DES+W+ LN+ LHR SST DGKYD
Sbjct: 630 QAEDRAHRRGQTSAVNVYIFCAKDTMDESNWQNLNKKLHRISSTTDGKYD 679


>ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319162|gb|EFH49584.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1194

 Score =  111 bits (277), Expect(2) = 3e-43
 Identities = 55/84 (65%), Positives = 66/84 (78%)
 Frame = -2

Query: 429 SSHKMIIFAHHHKVTDRVQEFLCEKEIKFVRIDARDTSARDRQQAIHSFQHSKEVKIALV 250
           SS KM++FAHHHKV D +QEF+C+K I FVRID   T  RDRQ A+ SFQ S EVK+A++
Sbjct: 558 SSTKMVVFAHHHKVLDGIQEFMCDKGIGFVRIDGM-TLPRDRQLAVQSFQFSSEVKVAII 616

Query: 249 GILAGSSGLDLSAAQNVVFLELPE 178
           G+ AG  GLD SAAQNVVFLELP+
Sbjct: 617 GVEAGGVGLDFSAAQNVVFLELPK 640



 Score = 89.0 bits (219), Expect(2) = 3e-43
 Identities = 40/50 (80%), Positives = 43/50 (86%)
 Frame = -1

Query: 160 QAESRAHRRGQTKAVNVYIFCAKDTSDESHWKRLNRSLHRTSSTVDGKYD 11
           QAE RAHRRGQT AVNVYIFCAKDT DES+W+ LN+ LHR SST DGKYD
Sbjct: 647 QAEDRAHRRGQTSAVNVYIFCAKDTMDESNWQNLNKKLHRISSTTDGKYD 696


>ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealing helicase and
           endonuclease ZRANB3-like [Cucumis sativus]
          Length = 1241

 Score =  103 bits (257), Expect(2) = 5e-42
 Identities = 57/89 (64%), Positives = 65/89 (73%), Gaps = 6/89 (6%)
 Frame = -2

Query: 426 SHKMIIFAHHHKVTDRVQEFLCEKEIKFVRIDARDTSARDRQQAIHSFQHSKE------V 265
           S KMIIFAHHHKV D +QE +CEK I+FVRID   T ARDRQ A+  FQ S E      V
Sbjct: 549 SQKMIIFAHHHKVLDGLQELMCEKGIQFVRIDG-TTLARDRQSAVLLFQSSAEVXYNSCV 607

Query: 264 KIALVGILAGSSGLDLSAAQNVVFLELPE 178
           KIA++GI AG  GLD S+AQNVVFLELP+
Sbjct: 608 KIAIIGITAGGVGLDFSSAQNVVFLELPQ 636



 Score = 92.8 bits (229), Expect(2) = 5e-42
 Identities = 40/53 (75%), Positives = 48/53 (90%)
 Frame = -1

Query: 160 QAESRAHRRGQTKAVNVYIFCAKDTSDESHWKRLNRSLHRTSSTVDGKYDSLR 2
           QAE R+HRRGQTKAVN+YIFCAKDTSDESHW+ LN+SL R +ST DGKYD+++
Sbjct: 643 QAEDRSHRRGQTKAVNIYIFCAKDTSDESHWQNLNKSLRRITSTTDGKYDAIQ 695


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