BLASTX nr result

ID: Atractylodes22_contig00056307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056307
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         171   6e-41
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   171   6e-41
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             171   8e-41
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   171   8e-41
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         171   8e-41

>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  171 bits (433), Expect = 6e-41
 Identities = 79/125 (63%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
 Frame = -2

Query: 369 KNRTIMDMARSMLKAKSMPNAFWGEAVSCAVYVLNRSPTKGVPNITPTEAWSGLKPSVKH 190
           KNRTI++MARSMLK+K +P   W EAV+CAVY+LNRSPTK V   TP EAWSG KP V H
Sbjct: 131 KNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSH 190

Query: 189 LKVFGAVVYAHIPAETRRQLDDRAEKTIFIGY--KSGGYKLFNPATKKAIVSRDVTFVEE 16
           L+VFG++ +AH+P E R +LDD++EK IFIGY   S GYKL+NP TKK I+SR++ F EE
Sbjct: 191 LRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEE 250

Query: 15  ETWDW 1
             WDW
Sbjct: 251 GEWDW 255


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  171 bits (433), Expect = 6e-41
 Identities = 79/125 (63%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
 Frame = -2

Query: 369  KNRTIMDMARSMLKAKSMPNAFWGEAVSCAVYVLNRSPTKGVPNITPTEAWSGLKPSVKH 190
            KNRTI++MARSMLK+K +P   W EAV+CAVY+LNRSPTK V   TP EAWSG KP V H
Sbjct: 634  KNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSH 693

Query: 189  LKVFGAVVYAHIPAETRRQLDDRAEKTIFIGY--KSGGYKLFNPATKKAIVSRDVTFVEE 16
            L+VFG++ +AH+P E R +LDD++EK IFIGY   S GYKL+NP TKK I+SR++ F EE
Sbjct: 694  LRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEE 753

Query: 15   ETWDW 1
              WDW
Sbjct: 754  GEWDW 758


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  171 bits (432), Expect = 8e-41
 Identities = 79/125 (63%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
 Frame = -2

Query: 369 KNRTIMDMARSMLKAKSMPNAFWGEAVSCAVYVLNRSPTKGVPNITPTEAWSGLKPSVKH 190
           KNRTI++MARSMLK+K +P   W EAV+CAVY+LNRSPTK V   TP EAWSG KP V H
Sbjct: 573 KNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSH 632

Query: 189 LKVFGAVVYAHIPAETRRQLDDRAEKTIFIGY--KSGGYKLFNPATKKAIVSRDVTFVEE 16
           L+VFG++ +AH+P E R +LDD++EK IFIGY   S GYKL+NP TKK I+SR++ F EE
Sbjct: 633 LRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEE 692

Query: 15  ETWDW 1
             WDW
Sbjct: 693 GEWDW 697


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  171 bits (432), Expect = 8e-41
 Identities = 79/125 (63%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
 Frame = -2

Query: 369  KNRTIMDMARSMLKAKSMPNAFWGEAVSCAVYVLNRSPTKGVPNITPTEAWSGLKPSVKH 190
            KNRTI++MARSMLK+K +P   W EAV+CAVY+LNRSPTK V   TP EAWSG KP V H
Sbjct: 634  KNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSH 693

Query: 189  LKVFGAVVYAHIPAETRRQLDDRAEKTIFIGY--KSGGYKLFNPATKKAIVSRDVTFVEE 16
            L+VFG++ +AH+P E R +LDD++EK IFIGY   S GYKL+NP TKK I+SR++ F EE
Sbjct: 694  LRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEE 753

Query: 15   ETWDW 1
              WDW
Sbjct: 754  GEWDW 758


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  171 bits (432), Expect = 8e-41
 Identities = 79/125 (63%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
 Frame = -2

Query: 369  KNRTIMDMARSMLKAKSMPNAFWGEAVSCAVYVLNRSPTKGVPNITPTEAWSGLKPSVKH 190
            KNRTI++MARSMLK+K +P   W EAV+CAVY+LNRSPTK V   TP EAWSG KP V H
Sbjct: 634  KNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSH 693

Query: 189  LKVFGAVVYAHIPAETRRQLDDRAEKTIFIGY--KSGGYKLFNPATKKAIVSRDVTFVEE 16
            L+VFG++ +AH+P E R +LDD++EK IFIGY   S GYKL+NP TKK I+SR++ F EE
Sbjct: 694  LRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEE 753

Query: 15   ETWDW 1
              WDW
Sbjct: 754  GEWDW 758


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