BLASTX nr result

ID: Atractylodes22_contig00056256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056256
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322801.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_002308445.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002530159.1| conserved hypothetical protein [Ricinus comm...    76   3e-12
ref|XP_003635863.1| hypothetical protein MTR_013s0006 [Medicago ...    71   1e-10
ref|XP_003553615.1| PREDICTED: uncharacterized protein LOC100785...    66   3e-09

>ref|XP_002322801.1| predicted protein [Populus trichocarpa] gi|222867431|gb|EEF04562.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/46 (76%), Positives = 42/46 (91%)
 Frame = +3

Query: 210 RAVQGFGRIGGNSLAVEKDSNDPYVDFRESMLQMIMEKEIYGGDDL 347
           RAV+GFGR+GG S+AVEKDS+DPY+DFR SMLQMI+EK+IY  DDL
Sbjct: 101 RAVRGFGRVGGESVAVEKDSDDPYLDFRHSMLQMILEKQIYSKDDL 146


>ref|XP_002308445.1| predicted protein [Populus trichocarpa] gi|222854421|gb|EEE91968.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = +3

Query: 213 AVQGFGRIGGNSLAVEKDSNDPYVDFRESMLQMIMEKEIYGGDDL 347
           AV+GFGR+GG S+AVEKDS+DPY+DFR SMLQMI+EKEIY  DDL
Sbjct: 20  AVRGFGRVGGESVAVEKDSDDPYLDFRHSMLQMILEKEIYSKDDL 64


>ref|XP_002530159.1| conserved hypothetical protein [Ricinus communis]
           gi|223530320|gb|EEF32214.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/48 (72%), Positives = 41/48 (85%)
 Frame = +3

Query: 204 SLRAVQGFGRIGGNSLAVEKDSNDPYVDFRESMLQMIMEKEIYGGDDL 347
           S   V+GFGR+GG S+AVEKDS+DPY+DFR SMLQMI+EKEIY  DDL
Sbjct: 99  SRSTVRGFGRVGGESVAVEKDSDDPYLDFRHSMLQMILEKEIYSKDDL 146


>ref|XP_003635863.1| hypothetical protein MTR_013s0006 [Medicago truncatula]
           gi|355501798|gb|AES83001.1| hypothetical protein
           MTR_013s0006 [Medicago truncatula]
          Length = 199

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 45/122 (36%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
 Frame = +3

Query: 3   RISLSKIFHPKPN-------KYKRNHSHYYPDNHRRQQQYXXXXXXXXXXXXXXXXXXXX 161
           R+ LS IF PKP        K+K  ++ Y       + +Y                    
Sbjct: 24  RLKLSNIFSPKPKSKNPTYQKHKLYNNQYSSSGPWTEDKYDSTSTPNTTTTNTATTFSPY 83

Query: 162 XXXXXXXVDESEVRSLRAVQGFGRIGGNSLAVEKDSNDPYVDFRESMLQMIMEKEIYGGD 341
                   D +  +  R V G GR GG  +AVEKDS DPY+DFR SMLQMI+E EIY  D
Sbjct: 84  YSSNFSDSD-AYAKDQRRVGGLGRAGGEGVAVEKDSEDPYLDFRHSMLQMILENEIYSKD 142

Query: 342 DL 347
           DL
Sbjct: 143 DL 144


>ref|XP_003553615.1| PREDICTED: uncharacterized protein LOC100785434 [Glycine max]
          Length = 204

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 46/124 (37%), Positives = 56/124 (45%), Gaps = 9/124 (7%)
 Frame = +3

Query: 3   RISLSKIFHPKP-----NKYKRNHSHYYPDNHRRQQQYXXXXXXXXXXXXXXXXXXXXXX 167
           R +L +IFHPKP     N   R H H    +     Q+                      
Sbjct: 37  RPNLCRIFHPKPKPKNLNNTYRKHKHSSSSSSFFSGQWGGEDKCDSTSTTPTPTPTNTTF 96

Query: 168 XXXXXVDESEVRS----LRAVQGFGRIGGNSLAVEKDSNDPYVDFRESMLQMIMEKEIYG 335
                VD S        ++AV G GR G   +AVEKDS+DPY+DFR SMLQMI+E EIY 
Sbjct: 97  SPY--VDSSHFSDSDSYVKAVGGLGRAGKEGVAVEKDSDDPYLDFRHSMLQMILENEIYS 154

Query: 336 GDDL 347
             DL
Sbjct: 155 KQDL 158


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