BLASTX nr result

ID: Atractylodes22_contig00056254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056254
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    93   2e-17
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    93   2e-17
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    91   1e-16
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    79   4e-13
emb|CAN81876.1| hypothetical protein VITISV_034528 [Vitis vinifera]    66   3e-09

>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 35/89 (39%), Positives = 63/89 (70%)
 Frame = +1

Query: 1   WISKAELYFEIHGTPLHLRIRLAQLSMAGAAQHWFTIVKEVYEDLMWAQFKQELLQRFSG 180
           WI++ E+YF++  T   +R++LA+LSM G+  HWF ++ E  ++L W + K+ L+ R+ G
Sbjct: 70  WITRVEIYFDVQNTTDKMRVKLARLSMEGSTIHWFNLLMETEDELSWEKLKRALIARYGG 129

Query: 181 LEIQNPFEQLAMIKQSGSIHDYIDEFEYL 267
             ++NPFE+L+ I+Q GS+ ++++ FE L
Sbjct: 130 RRLENPFEELSTIRQKGSVEEFVEAFELL 158


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 35/89 (39%), Positives = 63/89 (70%)
 Frame = +1

Query: 1   WISKAELYFEIHGTPLHLRIRLAQLSMAGAAQHWFTIVKEVYEDLMWAQFKQELLQRFSG 180
           WI++AE+YF++  T   +R++LA+LSM G+  HWF ++ E  ++L W   K+ L+ R+ G
Sbjct: 87  WITRAEIYFDVQDTSDDMRVKLARLSMEGSTIHWFNLLMETEDELSWENLKRALIARYGG 146

Query: 181 LEIQNPFEQLAMIKQSGSIHDYIDEFEYL 267
             ++NPFE+L+ ++Q GS+ ++++ FE L
Sbjct: 147 RRLENPFEELSTLRQKGSVEEFVEAFELL 175


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 35/89 (39%), Positives = 63/89 (70%)
 Frame = +1

Query: 1    WISKAELYFEIHGTPLHLRIRLAQLSMAGAAQHWFTIVKEVYEDLMWAQFKQELLQRFSG 180
            WI++AE+YF++  TP  +R++L++LSM G   HWF ++ E  +DL   + K+ L+ R+ G
Sbjct: 760  WITRAEIYFDVQNTPDDMRVKLSRLSMEGPTIHWFNLLMETEDDLSREKLKKALIARYDG 819

Query: 181  LEIQNPFEQLAMIKQSGSIHDYIDEFEYL 267
              ++NPFE+L+ ++Q GS+ ++++ FE L
Sbjct: 820  RRLENPFEELSTLRQIGSVEEFVEAFELL 848


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/89 (41%), Positives = 55/89 (61%)
 Frame = +1

Query: 1   WISKAELYFEIHGTPLHLRIRLAQLSMAGAAQHWFTIVKEVYEDLMWAQFKQELLQRFSG 180
           WI++AE+YF +  T   +++ LAQL M G   H+F  + E  E L W   K  LL+R+ G
Sbjct: 97  WIARAEVYFNVQNTTPEIKVNLAQLCMDGPTIHFFKGLLEENETLTWEDLKDALLERYGG 156

Query: 181 LEIQNPFEQLAMIKQSGSIHDYIDEFEYL 267
           +   N FEQL+ ++Q G+I +YI +FE L
Sbjct: 157 VSDGNVFEQLSALQQEGTIEEYIADFERL 185


>emb|CAN81876.1| hypothetical protein VITISV_034528 [Vitis vinifera]
          Length = 1241

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
 Frame = +1

Query: 1   WISKAELYFEIHGTPLHLRIRLAQLSMAGAAQHWFTIVKEVY----EDLMWAQFKQELLQ 168
           W +K + +FE  G P+  ++ LA   + G A  W+  ++  Y    +++ WA F++EL  
Sbjct: 82  WFNKVDQFFEYQGIPVAQKVSLASFHLEGEANQWWQWLRRSYSEEGKEVXWADFEEELWA 141

Query: 169 RFSGLEIQNPFEQLAMIKQSGSIHDYIDEFEYL 267
           RF   E ++  E L+ +KQ GS+ DY  EFE L
Sbjct: 142 RFGPTECEDFDEALSRVKQMGSLRDYQREFEKL 174


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