BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056134
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus]         125   5e-27
gb|ABD19050.1| reverse transcriptase [Orobanche hirtiflora]           122   4e-26
gb|ABD19048.1| reverse transcriptase [Orobanche hirtiflora]           120   1e-25
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc...   120   1e-25
gb|ABD19044.1| reverse transcriptase [Orobanche hirtiflora]           119   2e-25

>gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 358

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/81 (71%), Positives = 66/81 (81%)
 Frame = +3

Query: 3   FLHGTLQETVYMQQPPGFIHPKFPNHVCRLQKSLYGLKQAPRAWYSRFSGFITSLGFRRS 182
           FLHG L ETVYMQQPPGF+H +FPN VC+L+KSLYGLKQAPRAWY+ F+  I S GFR S
Sbjct: 6   FLHGHLNETVYMQQPPGFVHRQFPNFVCKLKKSLYGLKQAPRAWYTWFASHILSHGFRSS 65

Query: 183 LCDTSLFIYHHGD*VAYLLLY 245
           +CD SLFIY  G  +AYLLLY
Sbjct: 66  VCDNSLFIYTQGTQMAYLLLY 86


>gb|ABD19050.1| reverse transcriptase [Orobanche hirtiflora]
          Length = 87

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/81 (69%), Positives = 63/81 (77%)
 Frame = +3

Query: 3   FLHGTLQETVYMQQPPGFIHPKFPNHVCRLQKSLYGLKQAPRAWYSRFSGFITSLGFRRS 182
           FLHG L ETVYM QPPGF  P  P++VC LQ+SLYGLKQAPRAW+ RF+ +IT LGF  S
Sbjct: 3   FLHGDLAETVYMHQPPGFRDPVHPDYVCLLQRSLYGLKQAPRAWFQRFANYITGLGFSHS 62

Query: 183 LCDTSLFIYHHGD*VAYLLLY 245
            CD+SLFIYH G   AYLLLY
Sbjct: 63  RCDSSLFIYHQGTNTAYLLLY 83


>gb|ABD19048.1| reverse transcriptase [Orobanche hirtiflora]
          Length = 87

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/81 (67%), Positives = 62/81 (76%)
 Frame = +3

Query: 3   FLHGTLQETVYMQQPPGFIHPKFPNHVCRLQKSLYGLKQAPRAWYSRFSGFITSLGFRRS 182
           F HG L ETVYM QPPGF  P  P++VC LQ+SLYGLKQAPRAW+ RF+ +IT LGF  S
Sbjct: 3   FFHGDLAETVYMHQPPGFRDPVHPDYVCLLQRSLYGLKQAPRAWFQRFANYITGLGFSHS 62

Query: 183 LCDTSLFIYHHGD*VAYLLLY 245
            CD+SLFIYH G   AYLLLY
Sbjct: 63  RCDSSLFIYHQGTNTAYLLLY 83


>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 978

 Score =  120 bits (300), Expect = 1e-25
 Identities = 56/81 (69%), Positives = 62/81 (76%)
 Frame = +3

Query: 3   FLHGTLQETVYMQQPPGFIHPKFPNHVCRLQKSLYGLKQAPRAWYSRFSGFITSLGFRRS 182
           FLHG L+ETVY QQP GF+ P  PN VC LQKSLYGLKQAPRAWY RF+ +I  LGF  S
Sbjct: 623 FLHGNLEETVYCQQPSGFVDPSAPNAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSS 682

Query: 183 LCDTSLFIYHHGD*VAYLLLY 245
             DTSLF+Y  GD +AYLLLY
Sbjct: 683 ASDTSLFVYKDGDNIAYLLLY 703


>gb|ABD19044.1| reverse transcriptase [Orobanche hirtiflora]
          Length = 87

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/81 (67%), Positives = 63/81 (77%)
 Frame = +3

Query: 3   FLHGTLQETVYMQQPPGFIHPKFPNHVCRLQKSLYGLKQAPRAWYSRFSGFITSLGFRRS 182
           FLHG L ETVYM QPPGF  P  P++VC LQ+SLYGLKQAPRAW+ RF+ +IT +GF  S
Sbjct: 3   FLHGDLAETVYMHQPPGFRDPVHPDYVCLLQRSLYGLKQAPRAWFQRFAHYITGIGFCHS 62

Query: 183 LCDTSLFIYHHGD*VAYLLLY 245
            CD+SLFIY HG   AYLLLY
Sbjct: 63  RCDSSLFIYRHGTDTAYLLLY 83