BLASTX nr result

ID: Atractylodes22_contig00056126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056126
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ96383.1| hypothetical protein [Prunus persica]                   78   1e-14
gb|ABW81116.1| putative gag-pol polyprotein [Boechera divaricarpa]     70   5e-13
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               75   7e-12
emb|CAR66100.1| RNaseH [Triticum durum]                                74   9e-12
ref|XP_003560741.1| PREDICTED: uncharacterized protein LOC100824...    66   4e-11

>gb|ABJ96383.1| hypothetical protein [Prunus persica]
          Length = 193

 Score = 77.8 bits (190), Expect(2) = 1e-14
 Identities = 36/59 (61%), Positives = 44/59 (74%)
 Frame = -1

Query: 239 HARTKHIESDYHFVKENVSKHELRVHFISTDDQVTDVFTKPLP*PRFQFLRSKLQVISR 63
           HARTKH+E DYHFV++ VS  +L V FIST DQ+ D+ TKPL  PRF F+R KL+V  R
Sbjct: 133 HARTKHVEIDYHFVRDQVSAGKLSVQFISTKDQLADIMTKPLSSPRFTFIRDKLRVHER 191



 Score = 26.6 bits (57), Expect(2) = 1e-14
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 273 IGATYLSANPVSRSHQTH 220
           +GATYLSANP+  +   H
Sbjct: 121 LGATYLSANPIFHARTKH 138


>gb|ABW81116.1| putative gag-pol polyprotein [Boechera divaricarpa]
          Length = 216

 Score = 70.1 bits (170), Expect(2) = 5e-13
 Identities = 33/60 (55%), Positives = 40/60 (66%)
 Frame = -1

Query: 239 HARTKHIESDYHFVKENVSKHELRVHFISTDDQVTDVFTKPLP*PRFQFLRSKLQVISRP 60
           H+R KHI  DYHFV++NV    LRV  +ST DQ+ D  TKPLP PRF  + SKL+V   P
Sbjct: 155 HSRMKHIAIDYHFVRDNVQSGRLRVTHVSTHDQLADALTKPLPRPRFSQITSKLRVTIAP 214



 Score = 28.9 bits (63), Expect(2) = 5e-13
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -3

Query: 273 IGATYLSANPVSRSHQTH 220
           +GATYLSANPV  S   H
Sbjct: 143 VGATYLSANPVFHSRMKH 160


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/60 (58%), Positives = 44/60 (73%)
 Frame = -1

Query: 239  HARTKHIESDYHFVKENVSKHELRVHFISTDDQVTDVFTKPLP*PRFQFLRSKLQVISRP 60
            H+RTKHIE DYH+V++ V + EL V ++ST DQ  D+FTK L   RFQFL SKL V +RP
Sbjct: 1310 HSRTKHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKGLSTQRFQFLASKLPVRARP 1369


>emb|CAR66100.1| RNaseH [Triticum durum]
          Length = 62

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 33/57 (57%), Positives = 45/57 (78%)
 Frame = -1

Query: 236 ARTKHIESDYHFVKENVSKHELRVHFISTDDQVTDVFTKPLP*PRFQFLRSKLQVIS 66
           ARTKHIE DYHFV+E VS+ +L++ FIS+ DQ+ D+FTKPLP P+F+  R  L ++S
Sbjct: 1   ARTKHIEVDYHFVRERVSQKQLQIKFISSKDQLADIFTKPLPLPQFEACRRNLTLLS 57


>ref|XP_003560741.1| PREDICTED: uncharacterized protein LOC100824035 [Brachypodium
           distachyon]
          Length = 270

 Score = 65.9 bits (159), Expect(2) = 4e-11
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = -1

Query: 239 HARTKHIESDYHFVKENVSKHELRVHFISTDDQVTDVFTKPLP*PRFQ 96
           HARTKHIE DYHFV+E V++  L++ FIS+ DQ+ D+FTKPL  P F+
Sbjct: 99  HARTKHIEVDYHFVRERVAQKLLQIKFISSKDQLADIFTKPLSLPLFE 146



 Score = 26.6 bits (57), Expect(2) = 4e-11
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 273 IGATYLSANPVSRSHQTH 220
           IGATYLS+NPV  +   H
Sbjct: 87  IGATYLSSNPVFHARTKH 104


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