BLASTX nr result

ID: Atractylodes22_contig00056112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056112
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320672.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi...   157   7e-37
ref|XP_002530602.1| pentatricopeptide repeat-containing protein,...   157   7e-37
emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]   157   7e-37
ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35

>ref|XP_002320672.1| predicted protein [Populus trichocarpa] gi|222861445|gb|EEE98987.1|
           predicted protein [Populus trichocarpa]
          Length = 720

 Score =  158 bits (399), Expect = 5e-37
 Identities = 74/97 (76%), Positives = 83/97 (85%)
 Frame = -1

Query: 291 NDNLSEEALSCFRQMQREGYHPDDCTFACVISASSNLSSPTQGKQIHCLALKSDIPSNKI 112
           N  LS EAL CFRQMQR GY PDDC+F C ISA SNLSSP+QGKQ H LA+KS+IPSN+I
Sbjct: 321 NKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQI 380

Query: 111 SVNNALIAMYSKCGNLQDARRLFDWMPEHNTVTLNSL 1
           SVNNAL+ MYSKCGNLQDAR+LF  MP+HNTVTLNS+
Sbjct: 381 SVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSI 417


>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  157 bits (398), Expect = 7e-37
 Identities = 76/97 (78%), Positives = 85/97 (87%)
 Frame = -1

Query: 291 NDNLSEEALSCFRQMQREGYHPDDCTFACVISASSNLSSPTQGKQIHCLALKSDIPSNKI 112
           N+   E+AL CFRQMQ  GY P+DC+F CVISA SNLSSP+QGKQIH LALKSDIPSN+I
Sbjct: 320 NEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRI 379

Query: 111 SVNNALIAMYSKCGNLQDARRLFDWMPEHNTVTLNSL 1
           SV+NALIAMYSKCGNLQDARRLFD M EHNTV+LNS+
Sbjct: 380 SVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSM 416


>ref|XP_002530602.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529850|gb|EEF31782.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 567

 Score =  157 bits (398), Expect = 7e-37
 Identities = 72/97 (74%), Positives = 85/97 (87%)
 Frame = -1

Query: 291 NDNLSEEALSCFRQMQREGYHPDDCTFACVISASSNLSSPTQGKQIHCLALKSDIPSNKI 112
           ++ LSEE L CFR+MQR G+ PDDC+F CVI A SNLSSP+QGKQIH + +KS+IPSN+I
Sbjct: 321 DEELSEETLDCFRRMQRAGFRPDDCSFVCVIRACSNLSSPSQGKQIHAMTVKSEIPSNQI 380

Query: 111 SVNNALIAMYSKCGNLQDARRLFDWMPEHNTVTLNSL 1
           SVNNAL+AMYSKCGNLQDARRLFD MPEHNTV+ NS+
Sbjct: 381 SVNNALVAMYSKCGNLQDARRLFDRMPEHNTVSFNSI 417


>emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  157 bits (398), Expect = 7e-37
 Identities = 76/97 (78%), Positives = 85/97 (87%)
 Frame = -1

Query: 291 NDNLSEEALSCFRQMQREGYHPDDCTFACVISASSNLSSPTQGKQIHCLALKSDIPSNKI 112
           N+   E+AL CFRQMQ  GY P+DC+F CVISA SNLSSP+QGKQIH LALKSDIPSN+I
Sbjct: 320 NEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRI 379

Query: 111 SVNNALIAMYSKCGNLQDARRLFDWMPEHNTVTLNSL 1
           SV+NALIAMYSKCGNLQDARRLFD M EHNTV+LNS+
Sbjct: 380 SVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSM 416


>ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  152 bits (384), Expect = 3e-35
 Identities = 67/96 (69%), Positives = 84/96 (87%)
 Frame = -1

Query: 288 DNLSEEALSCFRQMQREGYHPDDCTFACVISASSNLSSPTQGKQIHCLALKSDIPSNKIS 109
           ++LSE+ L CFR+MQR G+ PDDC+F CV SA SNLSSP+ GKQ+H LA+KSD+P N++S
Sbjct: 324 EDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVS 383

Query: 108 VNNALIAMYSKCGNLQDARRLFDWMPEHNTVTLNSL 1
           VNNAL+AMYSKCGN+ DARR+FD MPEHNTV+LNS+
Sbjct: 384 VNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSM 419


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