BLASTX nr result

ID: Atractylodes22_contig00056083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056083
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]   103   1e-20
emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]   101   7e-20
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc...   100   9e-20
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   100   9e-20
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   100   1e-19

>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/113 (43%), Positives = 73/113 (64%)
 Frame = +3

Query: 12  TRQRPPNLRPNPKKTTPYNASAFTTDTTNPDTEPVSFTVANRFSQWRTAMADEYKALLRN 191
           TR +   ++P   K  P + +  +T  +  D  P + + A +   W T M +EY+AL+RN
Sbjct: 462 TRSKVGTIKP---KLLPDHITYLSTSVSPSDQLPTTVSQALKNPNWHTTMVEEYQALVRN 518

Query: 192 GTWSLVPRVPGSNVIDSKWVYKIKRDPSGAIQRYKARLVAKGFRQQAGIDYKE 350
            TW+LVP  P  NVIDSKW++++K +  G IQRYKARLVAKGF+Q AG+++ +
Sbjct: 519 NTWTLVPFHPSMNVIDSKWIFRVKYNSDGTIQRYKARLVAKGFQQYAGVEFTD 571


>emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]
          Length = 1269

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/125 (40%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
 Frame = +3

Query: 3    TTQTRQRPPNLRPNPKKTT---------PYNASAFTTDTTNPDTEPVSFTVANRFSQWRT 155
            T     +PP+L P+P             P      T     P  EP + T A +  +WR 
Sbjct: 768  TQNDPNQPPDLSPSPHVIVTXSKHNIHKPIQKLNLTAQLQQPTLEPTTVTQALKDPKWRQ 827

Query: 156  AMADEYKALLRNGTWSLVPRVPGSNVIDSKWVYKIKRDPSGAIQRYKARLVAKGFRQQAG 335
            A + E+  LLRNGTW LVP  P  N++  KW+++ K  P+G+I RYKARLVAKGF Q+ G
Sbjct: 828  AXSAEFDXLLRNGTWDLVPSHPTQNLVGCKWIFRTKYLPNGSIDRYKARLVAKGFHQRPG 887

Query: 336  IDYKE 350
            +DY E
Sbjct: 888  VDYSE 892


>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 900

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/81 (59%), Positives = 57/81 (70%)
 Frame = +3

Query: 108 EPVSFTVANRFSQWRTAMADEYKALLRNGTWSLVPRVPGSNVIDSKWVYKIKRDPSGAIQ 287
           EP S   A   + W+ AM  E+ ALL N TW LVP V G N+IDSKWVYKIK+   G I 
Sbjct: 383 EPSSLQEALSSANWKQAMDKEFSALLHNKTWHLVPPVKGKNIIDSKWVYKIKKKADGTID 442

Query: 288 RYKARLVAKGFRQQAGIDYKE 350
           RYKARLVAKGF+Q+ GIDY++
Sbjct: 443 RYKARLVAKGFKQRYGIDYED 463


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  100 bits (250), Expect = 9e-20
 Identities = 54/117 (46%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
 Frame = +3

Query: 3    TTQTRQRP-PNLRPNPKKTTPYNASAFTTDTTNPDTEPVSFTVANRFSQWRTAMADEYKA 179
            T Q  QRP   L+   +K   Y              EP +   A + + W+ AM  EY A
Sbjct: 886  TGQEAQRPRTRLQSGIRKEKVYTDGTVKWGMLTSTGEPENLQDALQNNNWKCAMDAEYMA 945

Query: 180  LLRNGTWSLVPRVPGSNVIDSKWVYKIKRDPSGAIQRYKARLVAKGFRQQAGIDYKE 350
            L++N TW LVP   G NVID KWVYKIKR   G++ RYKARLVAKGF+Q+ GIDY++
Sbjct: 946  LIKNNTWHLVPPQQGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYED 1002


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/90 (52%), Positives = 61/90 (67%)
 Frame = +3

Query: 81   TTDTTNPDTEPVSFTVANRFSQWRTAMADEYKALLRNGTWSLVPRVPGSNVIDSKWVYKI 260
            T   T   T P S + A +   WR AM+DEY AL+RNGTW LVP    +N++  KW+++I
Sbjct: 836  THKPTFQTTTPTSISQALKDQNWRQAMSDEYDALVRNGTWELVPPEDITNLVGCKWIFRI 895

Query: 261  KRDPSGAIQRYKARLVAKGFRQQAGIDYKE 350
            KR+  G+I RYKARLVAKGF Q+ G+DY E
Sbjct: 896  KRNSDGSIDRYKARLVAKGFHQRPGVDYHE 925


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