BLASTX nr result

ID: Atractylodes22_contig00056041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056041
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325640.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002523945.1| transcription factor, putative [Ricinus comm...    57   1e-06

>ref|XP_002325640.1| predicted protein [Populus trichocarpa] gi|222862515|gb|EEF00022.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/98 (40%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
 Frame = -1

Query: 286 DVGSSFRNPLPLASIFQNQLPLATIPDNNKPNLGLKSMNETLPQQSFGLALGTPSSSV-- 113
           D+G+ F N + L S+  ++    T PDN    L ++ M+ +L + S  +ALG PS +   
Sbjct: 136 DIGTGFSN-MTLPSVGSSKF---TNPDNMSSLLDMRDMHCSLSEPSLSMALGAPSGTTNF 191

Query: 112 LPYSNGIAEGRVQEKVPS-FKQEQRLRQMLPKPSKSGV 2
            P+  G  EGR Q K PS F+Q QR R +LPKPSK G+
Sbjct: 192 APFPGGAVEGREQGKTPSSFQQGQRSRPILPKPSKPGL 229


>ref|XP_002523945.1| transcription factor, putative [Ricinus communis]
           gi|223536792|gb|EEF38432.1| transcription factor,
           putative [Ricinus communis]
          Length = 861

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
 Frame = -1

Query: 238 QNQLPLATIPDNNKPNLGLKSMNETLPQQSFGLALGTPS--SSVLPYSNGIAEGRVQEKV 65
           Q+ +  +  P+  +  L ++ M+ +  Q S  +ALG PS  +S + Y+ G  +GR Q K 
Sbjct: 190 QSSVVPSKFPNGGRSILDMRDMHGSHAQPSLNMALGAPSGTTSFIQYACGAVDGREQGKT 249

Query: 64  PSFKQEQRLRQMLPKPSKSG 5
           P F Q QR R +LPKPSK+G
Sbjct: 250 PPFLQGQRSRPILPKPSKTG 269


Top