BLASTX nr result

ID: Atractylodes22_contig00056027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056027
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC24083.1| Match to calreticulin (AtCRTL) mRNA gb|U27698 and...    54   4e-06
ref|XP_002892491.1| hypothetical protein ARALYDRAFT_471010 [Arab...    54   4e-06
ref|XP_002892492.1| calreticulin 2 [Arabidopsis lyrata subsp. ly...    54   4e-06
ref|NP_172392.1| calreticulin-2 [Arabidopsis thaliana] gi|148886...    54   4e-06
gb|AAM63796.1| putative calcium-binding protein, calreticulin [A...    54   4e-06

>gb|AAC24083.1| Match to calreticulin (AtCRTL) mRNA gb|U27698 and DNA gb|U66344.
           ESTs gb|T45719, gb|T22451, gb|H36323 and gb|AA042519
           come from this gene [Arabidopsis thaliana]
          Length = 444

 Score = 53.5 bits (127), Expect(2) = 4e-06
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = +3

Query: 99  GGGYMKLLSGDVDQKKFGGDTPY 167
           GGGYMKLLSGDVDQKKFGGDTPY
Sbjct: 109 GGGYMKLLSGDVDQKKFGGDTPY 131



 Score = 21.9 bits (45), Expect(2) = 4e-06
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 242 YSIMFGPD 265
           YSIMFGPD
Sbjct: 131 YSIMFGPD 138


>ref|XP_002892491.1| hypothetical protein ARALYDRAFT_471010 [Arabidopsis lyrata subsp.
           lyrata] gi|297338333|gb|EFH68750.1| hypothetical protein
           ARALYDRAFT_471010 [Arabidopsis lyrata subsp. lyrata]
          Length = 432

 Score = 53.5 bits (127), Expect(2) = 4e-06
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = +3

Query: 99  GGGYMKLLSGDVDQKKFGGDTPY 167
           GGGYMKLLSGDVDQKKFGGDTPY
Sbjct: 108 GGGYMKLLSGDVDQKKFGGDTPY 130



 Score = 21.9 bits (45), Expect(2) = 4e-06
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 242 YSIMFGPD 265
           YSIMFGPD
Sbjct: 130 YSIMFGPD 137


>ref|XP_002892492.1| calreticulin 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297338334|gb|EFH68751.1| calreticulin 2 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 424

 Score = 53.5 bits (127), Expect(2) = 4e-06
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = +3

Query: 99  GGGYMKLLSGDVDQKKFGGDTPY 167
           GGGYMKLLSGDVDQKKFGGDTPY
Sbjct: 109 GGGYMKLLSGDVDQKKFGGDTPY 131



 Score = 21.9 bits (45), Expect(2) = 4e-06
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 242 YSIMFGPD 265
           YSIMFGPD
Sbjct: 131 YSIMFGPD 138


>ref|NP_172392.1| calreticulin-2 [Arabidopsis thaliana]
           gi|148886629|sp|Q38858.3|CALR2_ARATH RecName:
           Full=Calreticulin-2; Flags: Precursor
           gi|15010710|gb|AAK74014.1| At1g09210/T12M4_8
           [Arabidopsis thaliana] gi|16974341|gb|AAL31155.1|
           At1g09210/T12M4_8 [Arabidopsis thaliana]
           gi|332190293|gb|AEE28414.1| calreticulin-2 [Arabidopsis
           thaliana]
          Length = 424

 Score = 53.5 bits (127), Expect(2) = 4e-06
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = +3

Query: 99  GGGYMKLLSGDVDQKKFGGDTPY 167
           GGGYMKLLSGDVDQKKFGGDTPY
Sbjct: 109 GGGYMKLLSGDVDQKKFGGDTPY 131



 Score = 21.9 bits (45), Expect(2) = 4e-06
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 242 YSIMFGPD 265
           YSIMFGPD
Sbjct: 131 YSIMFGPD 138


>gb|AAM63796.1| putative calcium-binding protein, calreticulin [Arabidopsis
           thaliana]
          Length = 424

 Score = 53.5 bits (127), Expect(2) = 4e-06
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = +3

Query: 99  GGGYMKLLSGDVDQKKFGGDTPY 167
           GGGYMKLLSGDVDQKKFGGDTPY
Sbjct: 109 GGGYMKLLSGDVDQKKFGGDTPY 131



 Score = 21.9 bits (45), Expect(2) = 4e-06
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 242 YSIMFGPD 265
           YSIMFGPD
Sbjct: 131 YSIMFGPD 138


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