BLASTX nr result

ID: Atractylodes22_contig00056008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056008
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containi...   210   8e-53
ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containi...   201   5e-50
ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   198   3e-49
dbj|BAJ89270.1| predicted protein [Hordeum vulgare subsp. vulgare]    194   5e-48
ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47

>ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Vitis vinifera]
          Length = 573

 Score =  210 bits (535), Expect = 8e-53
 Identities = 100/136 (73%), Positives = 117/136 (86%)
 Frame = -2

Query: 409 IVLWQTLLGACKTYGEVEMAEKASRKLVEMGSSSDGDFVLLSNIYAAHRRWKDVGRVRDA 230
           +VLWQ+LLGACKTYG VEMAE ASRKLVEMGS+S GDFVLLSN+YAA  RW+DVGRVR+A
Sbjct: 370 VVLWQSLLGACKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARERWEDVGRVREA 429

Query: 229 MKDKEVKKVPGFSYIDINGVIHKFVNGDQSHSNLQEIYRKLDEIKNRIMEHGYVPETDYV 50
           MK ++V+KVPGFSYI++ GVIHKFVNGDQSH + +EIY KLDEI+ RI   GYV ET  V
Sbjct: 430 MKSRDVRKVPGFSYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIRFRIKAFGYVAETSLV 489

Query: 49  LHDIGPEEKQNALSYH 2
           LHDIG E+K+NAL +H
Sbjct: 490 LHDIGEEDKENALCHH 505


>ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  201 bits (511), Expect = 5e-50
 Identities = 97/136 (71%), Positives = 114/136 (83%)
 Frame = -2

Query: 409 IVLWQTLLGACKTYGEVEMAEKASRKLVEMGSSSDGDFVLLSNIYAAHRRWKDVGRVRDA 230
           +VLWQTLLGAC+TYG+VEMAE ASRKLVEMG  S GDFVLLSN+YAA +RW DVGRVRDA
Sbjct: 373 MVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDA 432

Query: 229 MKDKEVKKVPGFSYIDINGVIHKFVNGDQSHSNLQEIYRKLDEIKNRIMEHGYVPETDYV 50
           M+ ++VKK PGFSYI+I G ++KFVNGDQSHS+ +EIY KLDEI  RI  +GY  +T  V
Sbjct: 433 MRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNV 492

Query: 49  LHDIGPEEKQNALSYH 2
           LHDIG E+K+NAL YH
Sbjct: 493 LHDIGDEDKENALCYH 508


>ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  198 bits (504), Expect = 3e-49
 Identities = 96/136 (70%), Positives = 113/136 (83%)
 Frame = -2

Query: 409 IVLWQTLLGACKTYGEVEMAEKASRKLVEMGSSSDGDFVLLSNIYAAHRRWKDVGRVRDA 230
           +VLWQTLLGAC+TYG+VEMAE ASRKLVEMG  S G FVLLSN+YAA +RW DVGRVRDA
Sbjct: 373 MVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDA 432

Query: 229 MKDKEVKKVPGFSYIDINGVIHKFVNGDQSHSNLQEIYRKLDEIKNRIMEHGYVPETDYV 50
           M+ ++VKK PGFSYI+I G ++KFVNGDQSHS+ +EIY KLDEI  RI  +GY  +T  V
Sbjct: 433 MRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNV 492

Query: 49  LHDIGPEEKQNALSYH 2
           LHDIG E+K+NAL YH
Sbjct: 493 LHDIGDEDKENALCYH 508


>dbj|BAJ89270.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 580

 Score =  194 bits (494), Expect = 5e-48
 Identities = 93/136 (68%), Positives = 111/136 (81%)
 Frame = -2

Query: 409 IVLWQTLLGACKTYGEVEMAEKASRKLVEMGSSSDGDFVLLSNIYAAHRRWKDVGRVRDA 230
           IVLWQTLLGA KT+G+VE+AE A+ KL E+GS+ DGD+VLLSN+YA+  RW DVGRVRD 
Sbjct: 377 IVLWQTLLGASKTHGDVELAEVAATKLTELGSNVDGDYVLLSNVYASKARWADVGRVRDT 436

Query: 229 MKDKEVKKVPGFSYIDINGVIHKFVNGDQSHSNLQEIYRKLDEIKNRIMEHGYVPETDYV 50
           M+  +V+KVPGFSY +I+GV+HKF+NGD+ H  LQEIYR L EI +RI E GY PET  V
Sbjct: 437 MRSNDVRKVPGFSYTEISGVMHKFINGDKEHPRLQEIYRALGEIMSRIGELGYEPETSNV 496

Query: 49  LHDIGPEEKQNALSYH 2
           LHDIG EEKQ ALSYH
Sbjct: 497 LHDIGEEEKQYALSYH 512


>ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|222856179|gb|EEE93726.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score =  193 bits (491), Expect = 1e-47
 Identities = 92/136 (67%), Positives = 112/136 (82%)
 Frame = -2

Query: 409 IVLWQTLLGACKTYGEVEMAEKASRKLVEMGSSSDGDFVLLSNIYAAHRRWKDVGRVRDA 230
           IVLWQTLLGA +T+  VE+AE  SRKLVEMGS+  GDFVLLSN+YAA  RW DVGRVR+A
Sbjct: 375 IVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVGRVREA 434

Query: 229 MKDKEVKKVPGFSYIDINGVIHKFVNGDQSHSNLQEIYRKLDEIKNRIMEHGYVPETDYV 50
           MK+++VKKVPG SYI+ NGVIHKF N D+SH + +EIY KLDEI+ R+ E+GYV ET +V
Sbjct: 435 MKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRFRVKEYGYVAETSFV 494

Query: 49  LHDIGPEEKQNALSYH 2
           LHDIG E+K+N L +H
Sbjct: 495 LHDIGEEDKENVLGHH 510


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