BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055997
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]               90   2e-16
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    88   8e-16
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...    80   1e-13
gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group...    76   2e-12
emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group]            76   3e-12

>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
          Length = 826

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/99 (46%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
 Frame = +1

Query: 1   QTRKLLLRCDSTGDLYPVXXXXXXXXXXXXXXX-IWHQRLGHPGDNVLRSLVSNGFISCN 177
           QTR ++ RC+S+GDLYP                 +WH+RLGH G   L  LVS+  ISCN
Sbjct: 560 QTRNVIARCNSSGDLYPFFPPATSATALLAAPASLWHRRLGHLGREALSQLVSSSAISCN 619

Query: 178 TVKSPMLCHTCQLGKHVRLPFFRSESVVDSVFDIIHSDL 294
                 LCH CQLG+H RLPF  S S   + FD+IH DL
Sbjct: 620 KDDDYHLCHACQLGRHTRLPFSTSTSRATNNFDLIHCDL 658


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/103 (43%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
 Frame = +1

Query: 1   QTRKLLLRCDSTGDLYPVXXXXXXXXXXXXXXX-----IWHQRLGHPGDNVLRSLVSNGF 165
           +TR  LLRCDS+G LY V                    IWH+RLGHP   +L  L+S+  
Sbjct: 458 KTRNKLLRCDSSGPLYSVTPSSYPSSHHALAATTSDSFIWHRRLGHPSSTLLSHLLSSLS 517

Query: 166 ISCNTVKSPMLCHTCQLGKHVRLPFFRSESVVDSVFDIIHSDL 294
           IS        LC  CQLGKH RLPFF S ++  S+F+I+HSD+
Sbjct: 518 ISVPKTDLTSLCQACQLGKHTRLPFFNSNTIASSLFEIVHSDI 560


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
 Frame = +1

Query: 1   QTRKLLLRCDSTGDLYPVXXXXXXXXXXXXXXX---IWHQRLGHPGDNVLRSLVSNGFIS 171
           +TR+++LRC+S GDLY +                  +WH+RLGHP    +++L     + 
Sbjct: 454 RTRRVILRCNSRGDLYTLPIAAPAIAAHSFLAQSSTLWHRRLGHPSSAAIQTLHKLAILP 513

Query: 172 CNTVKSPMLCHTCQLGKHVRLPFFRSESVVDSVFDIIHSDL 294
           C  +    LCH C+LGKH RLPF RS+S   S F+++H D+
Sbjct: 514 CTKIDHS-LCHACKLGKHTRLPFSRSQSSTSSPFELVHCDV 553


>gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108709048|gb|ABF96843.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 594

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
 Frame = +1

Query: 1   QTRKLLLRCDSTGDLYPVXXXXXXXXXXXXXXX---IWHQRLGHPGDNVLRSLVSNGFIS 171
           QTR+++LRC+S G+LY +                  +WH+RLGHPG   + +L     I 
Sbjct: 446 QTRRVILRCNSHGELYTLPAAAPSIAAHYNLATSSTLWHRRLGHPGPTAVTTLQHLSAIP 505

Query: 172 CNTVKSPMLCHTCQLGKHVRLPFFRSESVVDSVFDIIHSDL 294
            +   +  LCH CQLGKH RLPF +S S   S F+++H D+
Sbjct: 506 RSKTNNS-LCHACQLGKHTRLPFNKSTSSTSSPFELVHCDV 545


>emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group]
          Length = 1455

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
 Frame = +1

Query: 1   QTRKLLLRCDSTGDLYPVXXXXXXXXXXXXXXX---IWHQRLGHPGDNVLRSLVSNGFIS 171
           QTR+++LRC+S G+LY +                  +WH+RLGHPG   + +L     I 
Sbjct: 527 QTRRVILRCNSHGELYTLPAAAPSIAAHCNLATSSTLWHRRLGHPGPTAVTTLQHLSAIP 586

Query: 172 CNTVKSPMLCHTCQLGKHVRLPFFRSESVVDSVFDIIHSD 291
            +   +  LCH CQLGKH RLPF +S S   S F+++H D
Sbjct: 587 RSKTNNS-LCHACQLGKHTRLPFNKSTSSTSSPFELVHCD 625