BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055965
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     191   4e-47
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   191   5e-47
gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subc...   191   5e-47
gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Jap...   191   5e-47
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   189   2e-46

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  191 bits (486), Expect = 4e-47
 Identities = 93/129 (72%), Positives = 108/129 (83%)
 Frame = +3

Query: 3    LNEDVYMVQPEGFKHPEHPDKVCKLQKSIYGLKQASRSWNLCFDEKMKTFGFTKSEDEPC 182
            L+EDVYM+QP+GF  PE P K+CKLQKSIYGLKQASRSWN+ FDE +K FGF K+E+E C
Sbjct: 916  LSEDVYMIQPQGFVDPESPGKICKLQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEEEAC 975

Query: 183  AYVRTSGNNKVFLVLYVDDILLIGNDIPTLTEVKTWLGTCFAMKDLGEASYILGIKIYRD 362
             Y + SG+  VFL+LYVDDILLIGNDIP L  VK+ L   F+MKDLGEA+YILGI+IYRD
Sbjct: 976  VYKKVSGSAIVFLILYVDDILLIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRD 1035

Query: 363  RSKRLIGLS 389
            RSKRLIGLS
Sbjct: 1036 RSKRLIGLS 1044


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  191 bits (485), Expect = 5e-47
 Identities = 92/129 (71%), Positives = 107/129 (82%)
 Frame = +3

Query: 3    LNEDVYMVQPEGFKHPEHPDKVCKLQKSIYGLKQASRSWNLCFDEKMKTFGFTKSEDEPC 182
            L+EDVYM QPEGF  P +  KVCKLQKSIYGLKQASRSWN+ FDE++K FGF K+++EPC
Sbjct: 912  LSEDVYMTQPEGFVDPNNASKVCKLQKSIYGLKQASRSWNIRFDEEIKRFGFVKNKEEPC 971

Query: 183  AYVRTSGNNKVFLVLYVDDILLIGNDIPTLTEVKTWLGTCFAMKDLGEASYILGIKIYRD 362
             Y++ SG+  V L+LYVDDILLIGNDIP L  VK  L   F+MKDLGEA+YILGIKIYRD
Sbjct: 972  VYMKVSGSTLVILILYVDDILLIGNDIPMLESVKASLKNSFSMKDLGEAAYILGIKIYRD 1031

Query: 363  RSKRLIGLS 389
            RS+RLIGLS
Sbjct: 1032 RSRRLIGLS 1040


>gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 649

 Score =  191 bits (485), Expect = 5e-47
 Identities = 91/129 (70%), Positives = 106/129 (82%)
 Frame = +3

Query: 3   LNEDVYMVQPEGFKHPEHPDKVCKLQKSIYGLKQASRSWNLCFDEKMKTFGFTKSEDEPC 182
           L+EDVYM QP+GF  P+   ++CKLQKSIYGLKQASRSW +CFDE +K  GF K+E+EPC
Sbjct: 293 LDEDVYMTQPKGFVDPQSAKRICKLQKSIYGLKQASRSWKICFDEVVKVLGFVKNEEEPC 352

Query: 183 AYVRTSGNNKVFLVLYVDDILLIGNDIPTLTEVKTWLGTCFAMKDLGEASYILGIKIYRD 362
            Y + SG+  VFL+LYVDDILLIGNDIP L  VKT L   F+MKDLGEA+YILGI+IYRD
Sbjct: 353 VYKKISGSTLVFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRD 412

Query: 363 RSKRLIGLS 389
           RSKRLIGLS
Sbjct: 413 RSKRLIGLS 421


>gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Japonica Group]
          Length = 637

 Score =  191 bits (485), Expect = 5e-47
 Identities = 91/129 (70%), Positives = 106/129 (82%)
 Frame = +3

Query: 3   LNEDVYMVQPEGFKHPEHPDKVCKLQKSIYGLKQASRSWNLCFDEKMKTFGFTKSEDEPC 182
           L+EDVYM QP+GF  P+   ++CKLQKSIYGLKQASRSW +CFDE +K  GF K+E+EPC
Sbjct: 281 LDEDVYMTQPKGFVDPQSAKRICKLQKSIYGLKQASRSWKICFDEVVKVLGFVKNEEEPC 340

Query: 183 AYVRTSGNNKVFLVLYVDDILLIGNDIPTLTEVKTWLGTCFAMKDLGEASYILGIKIYRD 362
            Y + SG+  VFL+LYVDDILLIGNDIP L  VKT L   F+MKDLGEA+YILGI+IYRD
Sbjct: 341 VYKKISGSTLVFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRD 400

Query: 363 RSKRLIGLS 389
           RSKRLIGLS
Sbjct: 401 RSKRLIGLS 409


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  189 bits (480), Expect = 2e-46
 Identities = 90/129 (69%), Positives = 108/129 (83%)
 Frame = +3

Query: 3   LNEDVYMVQPEGFKHPEHPDKVCKLQKSIYGLKQASRSWNLCFDEKMKTFGFTKSEDEPC 182
           L+EDVYM QPEGF  P +  KVCKLQKSIYGLKQASRSWN+ FDE++K FGF K+++EPC
Sbjct: 496 LHEDVYMTQPEGFVDPNNASKVCKLQKSIYGLKQASRSWNIRFDEEIKRFGFIKNKEEPC 555

Query: 183 AYVRTSGNNKVFLVLYVDDILLIGNDIPTLTEVKTWLGTCFAMKDLGEASYILGIKIYRD 362
            Y++ SG+  V L+LYVDDILL+GNDIP L  VK+ L   F+MKDLG+A+YILGI+IYRD
Sbjct: 556 VYMKVSGSTLVILILYVDDILLVGNDIPMLESVKSSLRKSFSMKDLGDAAYILGIRIYRD 615

Query: 363 RSKRLIGLS 389
           RSKRLIGLS
Sbjct: 616 RSKRLIGLS 624