BLASTX nr result

ID: Atractylodes22_contig00055960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055960
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    87   1e-15
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    81   8e-14
ref|XP_004170165.1| PREDICTED: uncharacterized protein LOC101232...    59   4e-07
emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]    59   4e-07
ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213...    57   2e-06

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 39/72 (54%), Positives = 54/72 (75%)
 Frame = +2

Query: 2   GNSNVILGLQWLEKLGAFTTNWKT*VMSFKWNGTTVTLKSDTSLDCTRISLKNMWRSMVK 181
           GNS++ILG+QWLEKLG   TNWKT  + +K    TVTL+ + +L  T +SLK M+R++ K
Sbjct: 500 GNSDLILGVQWLEKLGTMVTNWKTQTLQYKEGNETVTLRGNPALSRTEVSLKAMYRTLRK 559

Query: 182 EGGGYLIQLNQV 217
           EGGG+L+ LNQ+
Sbjct: 560 EGGGFLVDLNQM 571


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/74 (54%), Positives = 52/74 (70%)
 Frame = +2

Query: 2   GNSNVILGLQWLEKLGAFTTNWKT*VMSFKWNGTTVTLKSDTSLDCTRISLKNMWRSMVK 181
           GNS+VILG+QWLE LG   +NWKT  MSF+  G   TL  D +L  +++SLK M R++ K
Sbjct: 564 GNSDVILGVQWLETLGTVVSNWKTQKMSFQLGGVPYTLTGDPTLARSKVSLKAMLRTLRK 623

Query: 182 EGGGYLIQLNQVEA 223
           EGGG  ++ NQVEA
Sbjct: 624 EGGGLWLECNQVEA 637


>ref|XP_004170165.1| PREDICTED: uncharacterized protein LOC101232744 [Cucumis sativus]
          Length = 426

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/74 (40%), Positives = 43/74 (58%)
 Frame = +2

Query: 2   GNSNVILGLQWLEKLGAFTTNWKT*VMSFKWNGTTVTLKSDTSLDCTRISLKNMWRSMVK 181
           G  ++ILG+QWL  LG    +WK  VMSF  N   V +  D SL  T++SLK + +S  +
Sbjct: 234 GGVDMILGMQWLYSLGVTEVDWKNLVMSFVHNNKKVVIIGDPSLTKTQVSLKCLTKSWTE 293

Query: 182 EGGGYLIQLNQVEA 223
              GYL++   +EA
Sbjct: 294 SDLGYLVECRALEA 307


>emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]
          Length = 1242

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/76 (40%), Positives = 40/76 (52%)
 Frame = +2

Query: 2   GNSNVILGLQWLEKLGAFTTNWKT*VMSFKWNGTTVTLKSDTSLDCTRISLKNMWRSMVK 181
           GN++VILG+ WL  LG    NWK   M  K     + LK D SL  T +SLK M R++  
Sbjct: 285 GNTDVILGMPWLGTLGDVKVNWKMLTMKIKLGKIVILLKGDPSLSRTEVSLKAMVRALQH 344

Query: 182 EGGGYLIQLNQVEACS 229
            G G  ++L Q    S
Sbjct: 345 HGQGVWVELCQTSTTS 360


>ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213561, partial [Cucumis
           sativus]
          Length = 764

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   GNSNVILGLQWLEKLGAFTTNWKT*VMSFKWNGTTVTLKSDTSLDCTRISLKNMWRSMVK 181
           G  + +LG+QWL  LG    +WK   M+F  NG  V +K D SL    + LKNM +S   
Sbjct: 497 GGVDGVLGMQWLYSLGVTEVDWKNLTMTFLHNGKKVKIKGDPSLTKAMVGLKNMIKSWRD 556

Query: 182 EGGGYLIQLNQVEACSVPVVNT---EVVAPD 265
              G+LI+   +E    P  +    EV+A D
Sbjct: 557 SDQGFLIECRAMETMYEPPEDNGIEEVLAVD 587


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