BLASTX nr result

ID: Atractylodes22_contig00055931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055931
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]    91   8e-17
gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]       87   2e-15
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    86   3e-15
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc...    85   5e-15
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]      85   5e-15

>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 44/96 (45%), Positives = 62/96 (64%)
 Frame = -2

Query: 290 LANVHGISTAKELWEKLEQLYQGKGISNRLYLKEQFHTLRMNEGTKISDHLSVLNNIVSE 111
           L  V   +TA  LW K E  YQ K ++NRLY K Q HTL+M+EG ++ DHL+  N I+ +
Sbjct: 72  LREVADETTAVGLWRKFESKYQKKSLTNRLYQKRQLHTLKMSEGMQVRDHLNNFNRIILD 131

Query: 110 LEAIGVEVEDED*ALKFVLSLTPSYEHMKPILMYGK 3
           L  +GV+VE+ED A+  + SL  SYE+    +MYG+
Sbjct: 132 LNGVGVKVEEEDQAMILLCSLPSSYENFVDTMMYGR 167


>gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]
          Length = 289

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/88 (44%), Positives = 59/88 (67%)
 Frame = -2

Query: 266 TAKELWEKLEQLYQGKGISNRLYLKEQFHTLRMNEGTKISDHLSVLNNIVSELEAIGVEV 87
           T  +LW KLE LY  K ++NRL LK++ +TL M+EGT I  H+   N++++ L  I V++
Sbjct: 73  TTADLWSKLEDLYLMKSLTNRLLLKQRLYTLWMSEGTPIKSHIGEFNSVITYLSKIDVKI 132

Query: 86  EDED*ALKFVLSLTPSYEHMKPILMYGK 3
            DED AL  + SL PSY+H +  ++YG+
Sbjct: 133 NDEDQALLLLCSLLPSYKHFRDTMIYGR 160


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 37/94 (39%), Positives = 64/94 (68%)
 Frame = -2

Query: 284 NVHGISTAKELWEKLEQLYQGKGISNRLYLKEQFHTLRMNEGTKISDHLSVLNNIVSELE 105
           N+    TA+ +W +LE LY  K ++N+LYLK+Q + L M+EGT    HL+V N ++++L 
Sbjct: 74  NIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLA 133

Query: 104 AIGVEVEDED*ALKFVLSLTPSYEHMKPILMYGK 3
            +GV++E+ED A+  + SL  SY+++   +++GK
Sbjct: 134 NLGVKIEEEDKAILLLNSLPSSYDNLATTILHGK 167


>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 425

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 38/88 (43%), Positives = 60/88 (68%)
 Frame = -2

Query: 266 TAKELWEKLEQLYQGKGISNRLYLKEQFHTLRMNEGTKISDHLSVLNNIVSELEAIGVEV 87
           T KE+W+KL  LY  K ++++LYLK+Q + L+M E + +  H+ V N +V +L  + V++
Sbjct: 81  TPKEIWDKLASLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVKL 140

Query: 86  EDED*ALKFVLSLTPSYEHMKPILMYGK 3
           +DED A+  + SL PSYEH+   LM+GK
Sbjct: 141 DDEDMAIILLCSLPPSYEHVVTTLMHGK 168


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 38/94 (40%), Positives = 60/94 (63%)
 Frame = -2

Query: 290 LANVHGISTAKELWEKLEQLYQGKGISNRLYLKEQFHTLRMNEGTKISDHLSVLNNIVSE 111
           L ++    TAKE WE LE +Y+GK I N+L LKEQ   L+M EG  ++DH+    N ++ 
Sbjct: 46  LLHIGETMTAKEAWENLESVYKGKSIGNKLLLKEQLFGLKMEEGDDLNDHICKFQNCIAN 105

Query: 110 LEAIGVEVEDED*ALKFVLSLTPSYEHMKPILMY 9
           LE +G +++DED A+  + SL P ++H K  +++
Sbjct: 106 LEKVGAKMDDEDTAVMLLHSLPPLFKHFKTTMIF 139


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