BLASTX nr result

ID: Atractylodes22_contig00055853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055853
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315829.1| predicted protein [Populus trichocarpa] gi|2...   205   3e-51
ref|XP_002311563.1| predicted protein [Populus trichocarpa] gi|2...   204   5e-51
ref|XP_002521882.1| pentatricopeptide repeat-containing protein,...   203   1e-50
ref|XP_002273214.2| PREDICTED: uncharacterized protein At4g15970...   203   1e-50
emb|CBI27517.3| unnamed protein product [Vitis vinifera]              203   1e-50

>ref|XP_002315829.1| predicted protein [Populus trichocarpa] gi|222864869|gb|EEF02000.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score =  205 bits (522), Expect = 3e-51
 Identities = 91/142 (64%), Positives = 114/142 (80%)
 Frame = +1

Query: 1   GNSTDVESNIPNGGFSFVRSNVRSIKFYKYWYSSREMYPGLHDQDVLNNIKFDSFLIDID 180
           GNS+D++ N PNGGF++V+SN R+I+FYK+WYSSRE YPG HDQDVLN IKFD F+ D+ 
Sbjct: 252 GNSSDIQ-NRPNGGFNYVKSNNRTIEFYKFWYSSRETYPGYHDQDVLNFIKFDPFIEDLG 310

Query: 181 LQLRFLSTAYFGGFCEPSKDINKVCTMHANCCVGLDNKVHDLGIMLNDWKHFMALPPSIK 360
           L++RFL TA+FGG CEPSKD+N VCTMHANCC GLD+K+HDL IML DWK F++LPP++K
Sbjct: 311 LKMRFLDTAFFGGLCEPSKDLNLVCTMHANCCYGLDSKLHDLRIMLQDWKTFLSLPPALK 370

Query: 361 MSGRPTWRPPNNCTLALRRHFD 426
            S    W  P NC+L   R +D
Sbjct: 371 RSSSMLWTVPQNCSLNSLRRYD 392


>ref|XP_002311563.1| predicted protein [Populus trichocarpa] gi|222851383|gb|EEE88930.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  204 bits (520), Expect = 5e-51
 Identities = 90/133 (67%), Positives = 111/133 (83%)
 Frame = +1

Query: 1   GNSTDVESNIPNGGFSFVRSNVRSIKFYKYWYSSREMYPGLHDQDVLNNIKFDSFLIDID 180
           GNS+D++ N PNGGF++V+SN RSI+FYK+WYSSRE YPG HDQDVLN IKFD F+  + 
Sbjct: 146 GNSSDIQ-NRPNGGFNYVKSNKRSIEFYKFWYSSRETYPGFHDQDVLNFIKFDPFIESLG 204

Query: 181 LQLRFLSTAYFGGFCEPSKDINKVCTMHANCCVGLDNKVHDLGIMLNDWKHFMALPPSIK 360
           L++RFL TA+FGG CEPSKD+N VCTMHANCC GLD+K+HDLGIML DWK F++LPP++K
Sbjct: 205 LKMRFLDTAFFGGLCEPSKDLNLVCTMHANCCFGLDSKLHDLGIMLQDWKTFLSLPPTLK 264

Query: 361 MSGRPTWRPPNNC 399
            S   +WR P NC
Sbjct: 265 RSLSVSWRVPQNC 277


>ref|XP_002521882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538920|gb|EEF40518.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 394

 Score =  203 bits (517), Expect = 1e-50
 Identities = 91/141 (64%), Positives = 114/141 (80%)
 Frame = +1

Query: 1   GNSTDVESNIPNGGFSFVRSNVRSIKFYKYWYSSREMYPGLHDQDVLNNIKFDSFLIDID 180
           G+S ++  N PNGGF++VRSN RSI+FYK+WYSSRE YPG+HDQDVLN IK  SF+ D+ 
Sbjct: 244 GSSINIH-NKPNGGFNYVRSNNRSIEFYKFWYSSRETYPGIHDQDVLNKIKNASFIEDLG 302

Query: 181 LQLRFLSTAYFGGFCEPSKDINKVCTMHANCCVGLDNKVHDLGIMLNDWKHFMALPPSIK 360
           L++RFL TA+FGG CEPSKD+N VCTMHANCC GL++K+HDL IML DWK F++LPPS+K
Sbjct: 303 LKMRFLDTAFFGGLCEPSKDLNLVCTMHANCCYGLESKLHDLRIMLQDWKRFLSLPPSLK 362

Query: 361 MSGRPTWRPPNNCTLALRRHF 423
            S   +WR P NC+L   RH+
Sbjct: 363 RSSVVSWRVPQNCSLDSLRHY 383


>ref|XP_002273214.2| PREDICTED: uncharacterized protein At4g15970 [Vitis vinifera]
          Length = 415

 Score =  203 bits (516), Expect = 1e-50
 Identities = 89/128 (69%), Positives = 108/128 (84%)
 Frame = +1

Query: 22  SNIPNGGFSFVRSNVRSIKFYKYWYSSREMYPGLHDQDVLNNIKFDSFLIDIDLQLRFLS 201
           +N PNGGF++VRSN RSI+FYK+WYSSRE YPGLHDQDVLN IKFD F+++I L++RFL 
Sbjct: 269 NNRPNGGFNYVRSNNRSIEFYKFWYSSRETYPGLHDQDVLNIIKFDPFIMNIGLEMRFLD 328

Query: 202 TAYFGGFCEPSKDINKVCTMHANCCVGLDNKVHDLGIMLNDWKHFMALPPSIKMSGRPTW 381
           TA+FGG CEPSKD+N V TMHANCC GL++K+HDL IML DWK +M+LPPS+K S   TW
Sbjct: 329 TAHFGGLCEPSKDLNLVSTMHANCCFGLESKLHDLRIMLQDWKEYMSLPPSLKRSSEATW 388

Query: 382 RPPNNCTL 405
           R P NC+L
Sbjct: 389 RVPQNCSL 396


>emb|CBI27517.3| unnamed protein product [Vitis vinifera]
          Length = 288

 Score =  203 bits (516), Expect = 1e-50
 Identities = 89/128 (69%), Positives = 108/128 (84%)
 Frame = +1

Query: 22  SNIPNGGFSFVRSNVRSIKFYKYWYSSREMYPGLHDQDVLNNIKFDSFLIDIDLQLRFLS 201
           +N PNGGF++VRSN RSI+FYK+WYSSRE YPGLHDQDVLN IKFD F+++I L++RFL 
Sbjct: 142 NNRPNGGFNYVRSNNRSIEFYKFWYSSRETYPGLHDQDVLNIIKFDPFIMNIGLEMRFLD 201

Query: 202 TAYFGGFCEPSKDINKVCTMHANCCVGLDNKVHDLGIMLNDWKHFMALPPSIKMSGRPTW 381
           TA+FGG CEPSKD+N V TMHANCC GL++K+HDL IML DWK +M+LPPS+K S   TW
Sbjct: 202 TAHFGGLCEPSKDLNLVSTMHANCCFGLESKLHDLRIMLQDWKEYMSLPPSLKRSSEATW 261

Query: 382 RPPNNCTL 405
           R P NC+L
Sbjct: 262 RVPQNCSL 269


Top