BLASTX nr result

ID: Atractylodes22_contig00055837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055837
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24861.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_003633574.1| PREDICTED: protein gamma response 1-like [Vi...    91   1e-16
ref|XP_003539645.1| PREDICTED: protein gamma response 1-like [Gl...    72   5e-11
ref|XP_002513180.1| retinoblastoma binding protein, putative [Ri...    67   1e-09
ref|XP_002298444.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>emb|CBI24861.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 59/136 (43%), Positives = 77/136 (56%), Gaps = 9/136 (6%)
 Frame = -2

Query: 381 LNSPGMGRKSPDRPMVACE---RSNHNTNQQNSEDKKDIRLMQGSSSSSPL------VAQ 229
           LNSPG     P+    ACE   + N  +  +N +  K + L+Q SS  SP        ++
Sbjct: 405 LNSPGPENTIPETSAAACEANKQKNVVSFPENLDSVKRVGLIQSSSCQSPSSSGSAGASK 464

Query: 228 PDSNKTASLLSGTKRPNSNWRDMRPTKNRNGPDPHDDFLDTPLENIXXXXXXXXXXXEIH 49
             +N  +S L+GTKRP+S+WRD R  + + G DPHDDFLDTPLENI           E H
Sbjct: 465 CTTNLNSSSLAGTKRPSSSWRDTRSRQCQGGADPHDDFLDTPLENI-KGNLNKAKKEEYH 523

Query: 48  HLPGPVPKDMNFESSD 1
            LP  +PKDMNF+SSD
Sbjct: 524 DLPVAIPKDMNFDSSD 539


>ref|XP_003633574.1| PREDICTED: protein gamma response 1-like [Vitis vinifera]
          Length = 640

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/126 (42%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
 Frame = -2

Query: 351 PDRPMVACE---RSNHNTNQQNSEDKKDIRLMQGSSSSSPL------VAQPDSNKTASLL 199
           P+    ACE   + N  +  +N +  K + L+Q SS  SP        ++  +N  +S L
Sbjct: 410 PETSAAACEANKQKNVVSFPENLDSVKRVGLIQSSSCQSPSSSGSAGASKCTTNLNSSSL 469

Query: 198 SGTKRPNSNWRDMRPTKNRNGPDPHDDFLDTPLENIXXXXXXXXXXXEIHHLPGPVPKDM 19
           +GTKRP+S+WRD R  + + G DPHDDFLDTPLENI           E H LP  +PKDM
Sbjct: 470 AGTKRPSSSWRDTRSRQCQGGADPHDDFLDTPLENI-KGNLNKAKKEEYHDLPVAIPKDM 528

Query: 18  NFESSD 1
           NF+SSD
Sbjct: 529 NFDSSD 534


>ref|XP_003539645.1| PREDICTED: protein gamma response 1-like [Glycine max]
          Length = 469

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 47/123 (38%), Positives = 63/123 (51%)
 Frame = -2

Query: 369 GMGRKSPDRPMVACERSNHNTNQQNSEDKKDIRLMQGSSSSSPLVAQPDSNKTASLLSGT 190
           G+  ++PD  + AC+ S     ++ SE  +   L   SS    +   P S K  S  S T
Sbjct: 246 GLETQTPDVFVAACDISR--VKEKPSEIDRGWNLSSPSSGFRDVPKCPSSTKLVSA-SST 302

Query: 189 KRPNSNWRDMRPTKNRNGPDPHDDFLDTPLENIXXXXXXXXXXXEIHHLPGPVPKDMNFE 10
           KRP S+WR  R  ++R GPDPHDDFLDTPLENI                P  + KD++ +
Sbjct: 303 KRPASSWRQTRSHQSRAGPDPHDDFLDTPLENIRENFNKDLNK---EDQPCLIQKDISVD 359

Query: 9   SSD 1
           SSD
Sbjct: 360 SSD 362


>ref|XP_002513180.1| retinoblastoma binding protein, putative [Ricinus communis]
           gi|223547678|gb|EEF49171.1| retinoblastoma binding
           protein, putative [Ricinus communis]
          Length = 632

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
 Frame = -2

Query: 360 RKSPDRPMVA-CERSN---HNTNQQNSEDKKDIRLMQGSSSSSPLVAQ-----PDSNKTA 208
           RK  D    A CE       N      ED K ++ +  SS  SP  +      P + K+A
Sbjct: 402 RKHADTSAAAICEMKRVKIENEASDGLEDDKTVKAIPMSSFQSPTSSHIAPKCPPTAKSA 461

Query: 207 SLLSGTKRPNSNWRDMRPTKNRNGPDPHDDFLDTPLENI 91
            ++ GTKRP S W + R  + R+GPDPHDDFLDTPLEN+
Sbjct: 462 PVI-GTKRPTSRWIETRSHQRRDGPDPHDDFLDTPLENL 499


>ref|XP_002298444.1| predicted protein [Populus trichocarpa] gi|222845702|gb|EEE83249.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
 Frame = -2

Query: 363 GRKSPDRPMVACERSNHNTNQQNSEDKKDIRLMQG------SSSSSPLVAQ--PDSNKTA 208
           G KS D     CE     T  ++S+   D ++++        S +S  V    P + K+A
Sbjct: 398 GNKSVDASAAFCETKEVKTENESSDGLVDNKVVKSIPIANFKSPTSIFVTPKCPPTVKSA 457

Query: 207 SLLSGTKRPNSNWRDMRPTKNRNGPDPHDDFLDTPLENI 91
            ++ GTKRP S+W D R  + ++GPDPHDDFLDTPLE +
Sbjct: 458 QII-GTKRPASSWIDTRSHQGKDGPDPHDDFLDTPLEKL 495


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