BLASTX nr result

ID: Atractylodes22_contig00055824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055824
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321191.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-39
ref|XP_002530225.1| F-box protein SNE, putative [Ricinus communi...   158   5e-37
ref|XP_002269904.1| PREDICTED: F-box protein SNE [Vitis vinifera...   155   3e-36
ref|XP_003544480.1| PREDICTED: F-box protein SNE-like [Glycine max]   146   2e-33
ref|XP_003519657.1| PREDICTED: F-box protein SNE-like [Glycine max]   143   2e-32

>ref|XP_002321191.1| predicted protein [Populus trichocarpa] gi|222861964|gb|EEE99506.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score =  166 bits (421), Expect = 1e-39
 Identities = 81/125 (64%), Positives = 103/125 (82%), Gaps = 1/125 (0%)
 Frame = +1

Query: 52  VETKMKREKLNFRINDHVDLLIEVLQRLDGQSLGAAACVCRQWCSIVRNDSLWEHLCFRN 231
           +E  +K ++  F INDHVD+L+E+L+RLDG+SL  +ACVCR WC+I RNDSLWEHLCFR+
Sbjct: 1   MEDNVKEKRPKFCINDHVDILLEILKRLDGRSLCVSACVCRLWCTIARNDSLWEHLCFRH 60

Query: 232 MS-PPSDGVRSVVLALGGYRRLYLVCVRPVVSRLKRRRINGGAGESEVVRRVWNQHEGEL 408
           +S PPS GVR VV+ALGGY+RLY+VCVRPV+SRL R R+   AG+S+ VRRVW + E +L
Sbjct: 61  VSPPPSSGVRPVVVALGGYKRLYMVCVRPVLSRLGRLRL---AGDSDRVRRVWTRDEVQL 117

Query: 409 SLSLF 423
           SLSLF
Sbjct: 118 SLSLF 122


>ref|XP_002530225.1| F-box protein SNE, putative [Ricinus communis]
           gi|223530272|gb|EEF32172.1| F-box protein SNE, putative
           [Ricinus communis]
          Length = 155

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/120 (64%), Positives = 95/120 (79%), Gaps = 1/120 (0%)
 Frame = +1

Query: 67  KREKLNFRINDHVDLLIEVLQRLDGQSLGAAACVCRQWCSIVRNDSLWEHLCFRN-MSPP 243
           KR K  F INDHVD+L+E+L+RLDG+SLG AACVC  WC+I RNDSLWE+LCFR+ +SPP
Sbjct: 9   KRHK--FSINDHVDILVEILKRLDGRSLGVAACVCNLWCTIARNDSLWENLCFRHVISPP 66

Query: 244 SDGVRSVVLALGGYRRLYLVCVRPVVSRLKRRRINGGAGESEVVRRVWNQHEGELSLSLF 423
             GVR V++ALGGY+RLY+VCVRPV+S+L RR      GES+  RR+W + E EL LSLF
Sbjct: 67  PSGVRPVIVALGGYKRLYMVCVRPVLSQLGRRFRLSSGGESDRARRMWTRDEVELLLSLF 126


>ref|XP_002269904.1| PREDICTED: F-box protein SNE [Vitis vinifera]
           gi|147772267|emb|CAN67350.1| hypothetical protein
           VITISV_018090 [Vitis vinifera]
          Length = 170

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/123 (60%), Positives = 97/123 (78%), Gaps = 4/123 (3%)
 Frame = +1

Query: 67  KREKLNFRINDHVDLLIEVLQRLDGQSLGAAACVCRQWCSIVRNDSLWEHLCFRNMSPPS 246
           K +K  F IND+ D+L+E+L+RLDG+SLG AACVCR W S+  NDSLWEHLCFR++SPP 
Sbjct: 19  KEKKPRFFINDNTDILMEILKRLDGRSLGVAACVCRLWRSVTWNDSLWEHLCFRHVSPPP 78

Query: 247 DGVRSVVLALGGYRRLYLVCVRPVVSRLKRRRI----NGGAGESEVVRRVWNQHEGELSL 414
            GVR VV+ALGGYRRLY++C+RPV+SRL + +     +GG G+S++V RVW +   +LSL
Sbjct: 79  PGVRPVVVALGGYRRLYMMCLRPVLSRLGQMKRGLGGSGGGGDSDLVGRVWTRDSVQLSL 138

Query: 415 SLF 423
           SLF
Sbjct: 139 SLF 141


>ref|XP_003544480.1| PREDICTED: F-box protein SNE-like [Glycine max]
          Length = 154

 Score =  146 bits (368), Expect = 2e-33
 Identities = 76/122 (62%), Positives = 95/122 (77%), Gaps = 3/122 (2%)
 Frame = +1

Query: 67  KREKLNFRINDHVDLLIEVLQRLDGQSLGAAACVCRQWCSIVRN-DSLWEHLCFRNM-SP 240
           + ++  F IND++D+L E+L+RLDG SLG AACVCR WCS+ RN DSLWEHLCFR++ SP
Sbjct: 11  QEKRPRFFINDNIDILREILKRLDGPSLGVAACVCRLWCSLTRNDDSLWEHLCFRHVSSP 70

Query: 241 PSDGVRSVVLALGGYRRLYLVCVRPVVSRLKRRRINGGAGESEVVR-RVWNQHEGELSLS 417
           P+  VR+VV+ALGGY+RLY+VCVRPV+SRL         G SE VR RVW +HE +LSLS
Sbjct: 71  PTASVRAVVVALGGYKRLYMVCVRPVLSRL---------GNSERVRKRVWTRHEVQLSLS 121

Query: 418 LF 423
           LF
Sbjct: 122 LF 123


>ref|XP_003519657.1| PREDICTED: F-box protein SNE-like [Glycine max]
          Length = 154

 Score =  143 bits (360), Expect = 2e-32
 Identities = 78/136 (57%), Positives = 99/136 (72%), Gaps = 3/136 (2%)
 Frame = +1

Query: 25  MLQIHDNGIVETKMKREKLNFRINDHVDLLIEVLQRLDGQSLGAAACVCRQWCSIVRN-D 201
           M+Q   + + + K  R    F IND++D+L E+L+RLDG SLG AACVCR WCS+  N D
Sbjct: 1   MVQQQQHRVEQEKRPR----FFINDNIDILREILKRLDGPSLGVAACVCRLWCSLTSNDD 56

Query: 202 SLWEHLCFRNM-SPPSDGVRSVVLALGGYRRLYLVCVRPVVSRLKRRRINGGAGESEVVR 378
           SLWEHLCFR++ SPP   V++VV+ALGGY+RLY+VCVRPV+SRL         G+SE VR
Sbjct: 57  SLWEHLCFRHVSSPPPASVKAVVVALGGYKRLYMVCVRPVLSRL---------GDSERVR 107

Query: 379 -RVWNQHEGELSLSLF 423
            RVW +HE +LSLSLF
Sbjct: 108 KRVWTRHEVQLSLSLF 123


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