BLASTX nr result

ID: Atractylodes22_contig00055712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055712
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJ96383.1| hypothetical protein [Prunus persica]                  122   2e-26
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat...   113   1e-23
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   110   1e-22
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...   110   1e-22
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   110   2e-22

>gb|ABJ96383.1| hypothetical protein [Prunus persica]
          Length = 193

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/117 (50%), Positives = 77/117 (65%)
 Frame = -3

Query: 351 VYLGSNLISWSSKKQHVVARSSTXXXXXXXXXXXXEIRWXXXXXXXXXXXXTYSPNLWCD 172
           +YLG NL+SWS+KKQH VARSST            EI W            + SP LWCD
Sbjct: 60  IYLGCNLVSWSAKKQHTVARSSTEAEYRAIANTSTEITWLRSLLQELGFSTSTSPVLWCD 119

Query: 171 NIGATYLAVNPVFHQRTKHMEIDLHFIRDMVMSNQLSVRHVPSLVQIADILTKGLTA 1
           N+GATYL+ NP+FH RTKH+EID HF+RD V + +LSV+ + +  Q+ADI+TK L++
Sbjct: 120 NLGATYLSANPIFHARTKHVEIDYHFVRDQVSAGKLSVQFISTKDQLADIMTKPLSS 176


>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
            gi|31430072|gb|AAP52036.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1058

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/115 (50%), Positives = 71/115 (61%)
 Frame = -3

Query: 351  VYLGSNLISWSSKKQHVVARSSTXXXXXXXXXXXXEIRWXXXXXXXXXXXXTYSPNLWCD 172
            V+LGSNLISW+++KQ  V+RSST            EI W                 LWCD
Sbjct: 920  VFLGSNLISWNARKQATVSRSSTEAEYKALANATAEIMWVRKLLEELGISHPGPSQLWCD 979

Query: 171  NIGATYLAVNPVFHQRTKHMEIDLHFIRDMVMSNQLSVRHVPSLVQIADILTKGL 7
            NIGATYL+VNPVFH RTKH+EID HF+R+ V   QL+++ VPS  Q+AD  TK L
Sbjct: 980  NIGATYLSVNPVFHARTKHIEIDYHFVREQVAQKQLALQFVPSQDQVADGFTKAL 1034


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  110 bits (275), Expect = 1e-22
 Identities = 59/117 (50%), Positives = 74/117 (63%)
 Frame = -3

Query: 351  VYLGSNLISWSSKKQHVVARSSTXXXXXXXXXXXXEIRWXXXXXXXXXXXXTYSPNLWCD 172
            VYLG+NL+SW++ KQ VV+RSS             EI W            T  P L+ D
Sbjct: 1243 VYLGNNLVSWTASKQKVVSRSSAESEYRGLAIATAEIIWTQALLRELCISITSIPTLYYD 1302

Query: 171  NIGATYLAVNPVFHQRTKHMEIDLHFIRDMVMSNQLSVRHVPSLVQIADILTKGLTA 1
            NI A Y+A NPVFH RTKH+EIDLHFIRD V+ N+L ++++PS  Q ADILTK LT+
Sbjct: 1303 NISAYYMAKNPVFHARTKHIEIDLHFIRDQVLHNKLQLQYIPSTDQPADILTKHLTS 1359


>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7268438|emb|CAB80958.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1474

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/116 (48%), Positives = 69/116 (59%)
 Frame = -3

Query: 351  VYLGSNLISWSSKKQHVVARSSTXXXXXXXXXXXXEIRWXXXXXXXXXXXXTYSPNLWCD 172
            +YLG N ISWSSKKQ  VARSST            E++W               P+++CD
Sbjct: 1340 IYLGKNPISWSSKKQRGVARSSTESEYRAVANAASEVKWLCSLLSKLHIRLPIRPSIFCD 1399

Query: 171  NIGATYLAVNPVFHQRTKHMEIDLHFIRDMVMSNQLSVRHVPSLVQIADILTKGLT 4
            NIGATYL  NPVFH R KH+ ID HF+R+M+ S  L V HV +  Q+AD LTK L+
Sbjct: 1400 NIGATYLCANPVFHSRMKHIAIDYHFVRNMIQSGALRVSHVSTRDQLADALTKPLS 1455


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/115 (51%), Positives = 69/115 (60%)
 Frame = -3

Query: 351  VYLGSNLISWSSKKQHVVARSSTXXXXXXXXXXXXEIRWXXXXXXXXXXXXTYSPNLWCD 172
            VYLG NL+SWSSKKQ  VARSST            E+ W            T SP ++CD
Sbjct: 1219 VYLGRNLVSWSSKKQQTVARSSTEAEYRSVAATAAELCWVGSLLSDLGIKFTTSPVVYCD 1278

Query: 171  NIGATYLAVNPVFHQRTKHMEIDLHFIRDMVMSNQLSVRHVPSLVQIADILTKGL 7
            N+GAT L+ NP+FH R KH+ ID HFIRD V S  L V HV S  Q+AD+LTK L
Sbjct: 1279 NVGATQLSSNPIFHSRMKHVAIDYHFIRDQVQSGLLRVAHVSSADQLADLLTKPL 1333


Top