BLASTX nr result

ID: Atractylodes22_contig00055699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055699
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310338.1| white-brown-complex ABC transporter family [...    75   4e-12
emb|CAN62797.1| hypothetical protein VITISV_026840 [Vitis vinifera]    69   3e-10
ref|XP_002527217.1| ATP-binding cassette transporter, putative [...    59   5e-07

>ref|XP_002310338.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222853241|gb|EEE90788.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 732

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 4/84 (4%)
 Frame = -3

Query: 327 SPTPPPCRN-HNHSDKQIEDKGSSGKRLHLQTAGRSNQDKDFDHSVRSPWNN-SKSWS-- 160
           +PTPP   N H+    +  D+ + GKRLHLQT+ R  +  +FDHSVRSP+NN S+SWS  
Sbjct: 325 APTPPLRHNSHHQKGGRPGDRPNDGKRLHLQTSTR--EPNEFDHSVRSPFNNTSRSWSAS 382

Query: 159 QSGIMQSLKLTPTRQRSDQRTPHP 88
            SG++Q+L+ TP+RQR+D+   +P
Sbjct: 383 HSGVVQTLRFTPSRQRNDKTIQNP 406


>emb|CAN62797.1| hypothetical protein VITISV_026840 [Vitis vinifera]
          Length = 725

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
 Frame = -3

Query: 324 PTPPPCRNHNHSDKQIEDKGSSGKRLHLQTAGRSNQDKDFDHSVRSPWNNSKSW--SQSG 151
           PTP P  +H+H+   +E     G+RL LQ AG      DFDHS+RSP+N S+SW  S SG
Sbjct: 326 PTPTP--SHHHASPLVE-----GRRLPLQ-AGSQRSATDFDHSLRSPYNYSRSWSASHSG 377

Query: 150 IMQSLKLTPTRQRSDQR 100
           I+Q+L+ TP+RQR+D++
Sbjct: 378 IVQTLRFTPSRQRTDRK 394


>ref|XP_002527217.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223533393|gb|EEF35143.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 724

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
 Frame = -3

Query: 327 SPTPPPCRNHNHSDKQIEDKGSSGKRLHLQTAGRSNQDKDFDHSVRSPWNNSKSWSQS-- 154
           +PTPPP R  N +  ++   G+ G+RL LQT+  +    +F+HS+RSP     SWS S  
Sbjct: 324 APTPPPSRQ-NRAQVELGASGN-GRRLPLQTS--TQDSSEFEHSLRSP-----SWSGSHV 374

Query: 153 GIMQSLKLTPTRQRSDQRTPHP 88
           G++Q+L+ TP RQR+D++  +P
Sbjct: 375 GVVQTLRFTPVRQRNDKKLQNP 396


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