BLASTX nr result

ID: Atractylodes22_contig00055683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055683
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containi...    84   1e-14

>ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/121 (38%), Positives = 66/121 (54%)
 Frame = +3

Query: 84  IIKPFFKYPFSHHRSAFTKLFXXXXXLTHSVCVDYSDNAVTKNLDSQLRQLLVSPNPQFI 263
           ++KP FK P  H       L+      + S+ +  S N    +L++QLR L   PN QF 
Sbjct: 2   VLKPLFK-PHLHPHLPSQSLYLCFNLFSSSIPIPISPN----DLETQLRSLCQKPNSQFT 56

Query: 264 DAVLLFEQSADLGLIPSSSTCNFIMETLGRNSKYNLVLQFYSRMTSIGVMPWFLSYGAVI 443
           +AV LF  + D  L+PS +TCNF+++ L R+  Y L    Y RMT + V+P F S  A+I
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 444 E 446
           E
Sbjct: 117 E 117


Top