BLASTX nr result

ID: Atractylodes22_contig00055654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055654
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat...    72   6e-11
ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat...    70   2e-10
emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]    70   2e-10
ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat...    69   5e-10
ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat...    67   1e-09

>ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/78 (46%), Positives = 49/78 (62%)
 Frame = -1

Query: 366 ANHLLQEMMICGCMPDVFTFNIIIQGFFRWNETTMAVQFLRRMLDAGFSADVHTSTSLVN 187
           A  L +EM   GC PD  T+N+I +GF R NET  A+Q L+ ML  GFSAD  T T +V 
Sbjct: 513 ATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVE 572

Query: 186 LLTTKKLDNASKEVLKKF 133
           +L+   LD + K++L +F
Sbjct: 573 MLSDDGLDQSVKQILHEF 590


>ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/78 (47%), Positives = 47/78 (60%)
 Frame = -1

Query: 366 ANHLLQEMMICGCMPDVFTFNIIIQGFFRWNETTMAVQFLRRMLDAGFSADVHTSTSLVN 187
           AN L  EM   GC PD  T+N I QG  +  E   A+Q L+ ML  GFSADV T+T LV 
Sbjct: 507 ANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 566

Query: 186 LLTTKKLDNASKEVLKKF 133
           +L   KLD + K++L +F
Sbjct: 567 MLCDDKLDQSVKQILSEF 584


>emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/78 (47%), Positives = 47/78 (60%)
 Frame = -1

Query: 366 ANHLLQEMMICGCMPDVFTFNIIIQGFFRWNETTMAVQFLRRMLDAGFSADVHTSTSLVN 187
           AN L  EM   GC PD  T+N I QG  +  E   A+Q L+ ML  GFSADV T+T LV 
Sbjct: 506 ANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 565

Query: 186 LLTTKKLDNASKEVLKKF 133
           +L   KLD + K++L +F
Sbjct: 566 MLCDDKLDQSVKQILSEF 583


>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/78 (44%), Positives = 49/78 (62%)
 Frame = -1

Query: 366 ANHLLQEMMICGCMPDVFTFNIIIQGFFRWNETTMAVQFLRRMLDAGFSADVHTSTSLVN 187
           A+ L  EM   GC P+  T+N+I +GF R NET  A+Q  + ML  GFS DV T+T LV 
Sbjct: 493 ASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVE 552

Query: 186 LLTTKKLDNASKEVLKKF 133
           +L+   LD + K++L +F
Sbjct: 553 MLSDDGLDQSVKQILCEF 570


>ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/78 (46%), Positives = 49/78 (62%)
 Frame = -1

Query: 366 ANHLLQEMMICGCMPDVFTFNIIIQGFFRWNETTMAVQFLRRMLDAGFSADVHTSTSLVN 187
           A+ L  EM   G  P+  T+N+I +GF R NET   +Q L+ ML  GFSADV TST LV 
Sbjct: 498 ASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVE 557

Query: 186 LLTTKKLDNASKEVLKKF 133
           +L+   LD + K++L +F
Sbjct: 558 MLSDDGLDQSVKQILSEF 575


Top